CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
AAB09041
(
Xenopus laevis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AAB09041
T59432_0.6
Xenbase (2010-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAB09041
RRM
60
131
MFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMH
AAB09041
RRM
152
220
LFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCS
AAB09041
RRM
455
525
LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Xenopus laevis
RBPs
93 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BC1G_10628
Botrytis cinerea
BC1G_10628
N
0.000
fgenesh1_pg.00609_#_525
Aspergillus carbonarius
fgenesh1_pg.00609_#_525
N
0.000
NFIA_109400
Neosartorya fischeri
CADNFIAG00009700
N
0.000
ATEG_05545
Aspergillus terreus
CADATEAG00004689
N
0.000
AO090023000898
Aspergillus oryzae
CADAORAG00007984
N
0.000
ANIA_04398
Aspergillus nidulans
CADANIAG00006059
N
0.000
An04g01360
Aspergillus niger
CADANGAG00003845
N
0.000
AFUA_4G06840
Aspergillus fumigatus
CADAFUAG00007720
N
0.000
ACLA_046120
Aspergillus clavatus
CADACLAG00004343
N
0.000
UREG_05557
Uncinocarpus reesii
UREG_05557
N
0.000
TESG_01518
Trichophyton tonsurans
TESG_01518
N
0.000
TERG_04597
Trichophyton rubrum
TERG_04597
N
0.000
TEQG_06875
Trichophyton equinum
TEQG_06875
N
0.000
SS1G_10570
Sclerotinia sclerotiorum
SS1G_10570
N
0.000
PABG_04139
Paracoccidioides brasiliensis
PABG_04139
N
0.000
MGYG_01864
Microsporum gypseum
MGYG_01864
N
0.000
MCYG_01323
Microsporum canis
MCYG_01323
N
0.000
CPSG_03148
Coccidioides posadasii
CPSG_03148
N
0.000
PMAA_027430
Penicillium marneffei
PMAA_027430
N
0.000