AAB09041 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAB09041 T59432_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AAB09041 RRM 60 131
AAB09041 RRM 152 220
AAB09041 RRM 455 525

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

93 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.172.82.1 Capitella teleta e_gw1.172.82.1 I 0.705
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.972
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.995
e_gw.91.28.1 Branchiostoma floridae e_gw.91.28.1 I 0.797
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.995
Cugbp1 Rattus norvegicus ENSRNOG00000010379 N 0.901
Cugbp2 Rattus norvegicus ENSRNOG00000023661 N 0.995
CELF1 Sorex araneus ENSSARG00000003207 N 0.783
CELF1 Tupaia belangeri ENSTBEG00000005140 N 0.774
CELF2 Tupaia belangeri ENSTBEG00000007939 N 0.995
CUGBP2-1 Taeniopygia guttata ENSTGUG00000002136 N 0.995
CELF1 Vicugna pacos ENSVPAG00000000336 N 0.910
CUGBP1 Taeniopygia guttata ENSTGUG00000010377 N 0.920
CELF2 Tetraodon nigroviridis ENSTNIG00000007201 N 0.967
CELF1 Ochotona princeps ENSOPRG00000003239 N 0.896
CELF1 Pteropus vampyrus ENSPVAG00000007340 N 0.741
CELF2 Ochotona princeps ENSOPRG00000011502 N 0.995
CELF2 Oryzias latipes ENSORLG00000003894 N 0.887
CELF2 Oryzias latipes ENSORLG00000017111 N 0.784
CELF1 Procavia capensis ENSPCAG00000002631 N 0.877
CELF2 Procavia capensis ENSPCAG00000010882 N 0.844
ENSPPYG00000002083 Pongo pygmaeus ENSPPYG00000002083 N 0.995
ENSPPYG00000003302 Pongo pygmaeus ENSPPYG00000003302 N 0.901
CELF2 Pan troglodytes ENSPTRG00000002284 N 0.995
CELF1 Pan troglodytes ENSPTRG00000003568 N 0.783
CELF2 Tetraodon nigroviridis ENSTNIG00000016009 N 0.887
CELF1 Takifugu rubripes ENSTRUG00000000617 N 0.714
CELF1 Takifugu rubripes ENSTRUG00000001711 N 0.901
Ame_R017712 Ailuropoda melanoleuca Ame_R017712 N 0.995
AAC41243 Xenopus laevis AAC41243 N 0.901
AAH45035 Xenopus laevis AAH45035 N 1.000
AAH57743 Xenopus laevis AAH57743 N 0.887
AAI08575 Xenopus laevis AAI08575 N 0.901
ACH69783 Xenopus laevis ACH69783 N 0.963
O57406 Xenopus laevis O57406 N 0.901
Q6PF35 Xenopus laevis Q6PF35 N 0.887
Ame_R009875 Ailuropoda melanoleuca Ame_R009875 N 0.910
CELF2 Takifugu rubripes ENSTRUG00000010147 N 0.967
celf2 Xenopus tropicalis ENSXETG00000021992 N 1.000
AAH70706 Xenopus laevis AAH70706 N 0.887
CELF2 Takifugu rubripes ENSTRUG00000016905 N 0.883
CELF1 Tarsius syrichta ENSTSYG00000003866 N 0.741
CELF2 Tarsius syrichta ENSTSYG00000005118 N 0.797
CELF1 Tursiops truncatus ENSTTRG00000014157 N 0.910
CELF2 Tursiops truncatus ENSTTRG00000014665 N 0.825
CELF2 Vicugna pacos ENSVPAG00000009360 N 0.797
celf1 Xenopus tropicalis ENSXETG00000009044 N 0.901
Q7ZXE2 Xenopus laevis Q7ZXE2 N 1.000
CELF1 Anolis carolinensis ENSACAG00000002114 N 0.920
celf1 Danio rerio ENSDARG00000005315 N 0.892
CELF1 Dasypus novemcinctus ENSDNOG00000009523 N 0.769
Celf2 Dipodomys ordii ENSDORG00000006455 N 0.793
Celf1 Dipodomys ordii ENSDORG00000013721 N 0.896
CELF2 Equus caballus ENSECAG00000006649 N 0.995
CELF1 Equus caballus ENSECAG00000007741 N 0.910
CELF2 Erinaceus europaeus ENSEEUG00000005658 N 0.995
CELF1 Erinaceus europaeus ENSEEUG00000009782 N 0.783
CELF2 Echinops telfairi ENSETEG00000008414 N 0.771
celf2 Danio rerio ENSDARG00000002131 N 0.967
CELF2 Cavia porcellus ENSCPOG00000012567 N 0.995
CELF2 Anolis carolinensis ENSACAG00000007661 N 0.995
A7MB95_BOVIN Bos taurus ENSBTAG00000002520 N 0.910
CELF2 Canis familiaris ENSCAFG00000004973 N 0.995
CELF1 Canis familiaris ENSCAFG00000008452 N 0.910
CELF2 Choloepus hoffmanni ENSCHOG00000002945 N 0.939
CELF1 Choloepus hoffmanni ENSCHOG00000004196 N 0.770
ENSCING00000003762 Ciona intestinalis ENSCING00000003762 N 0.704
LOC100392717 Callithrix jacchus ENSCJAG00000020133 N 0.910
CELF1 Cavia porcellus ENSCPOG00000007871 N 0.910
CELF2 Homo sapiens ENSG00000048740 N 0.995
CELF1 Homo sapiens ENSG00000149187 N 0.910
CELF2 Gasterosteus aculeatus ENSGACG00000004426 N 0.892
CELF1 Myotis lucifugus ENSMLUG00000016631 N 0.761
CELF2 Macaca mulatta ENSMMUG00000011468 N 0.995
CELF1 Macaca mulatta ENSMMUG00000011657 N 0.910
CELF2 Monodelphis domestica ENSMODG00000016763 N 0.802
CELF1 Monodelphis domestica ENSMODG00000019913 N 0.920
Celf2 Mus musculus ENSMUSG00000002107 N 0.995
Celf1 Mus musculus ENSMUSG00000005506 N 0.901
CELF1 Ornithorhynchus anatinus ENSOANG00000007896 N 0.915
CELF1 Oryctolagus cuniculus ENSOCUG00000001311 N 0.910
CELF2 Microcebus murinus ENSMICG00000007867 N 0.995
CELF1 Microcebus murinus ENSMICG00000007157 N 0.868
CELF1 Gasterosteus aculeatus ENSGACG00000014226 N 0.808
CELF2_CHICK Gallus gallus ENSGALG00000006713 N 0.995
CELF1_CHICK Gallus gallus ENSGALG00000008097 N 0.920
CELF1 Gorilla gorilla ENSGGOG00000004106 N 0.732
CELF1 Loxodonta africana ENSLAFG00000003484 N 0.910
CELF2 Loxodonta africana ENSLAFG00000013612 N 0.995
CELF1 Macropus eugenii ENSMEUG00000007763 N 0.920
CELF2 Macropus eugenii ENSMEUG00000015276 N 0.840
CELF1 Meleagris gallopavo ENSMGAG00000010629 N 0.920
CELF2 Oryctolagus cuniculus ENSOCUG00000004961 N 0.995