KHSRP (Ornithorhynchus anatinus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSOANG00000000261 T19152_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.891
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.891
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.891
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.891
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000000448 KH 94 132
ENSOANP00000000448 KH 159 223
ENSOANP00000000448 KH 248 310
ENSOANP00000000448 KH 350 415
ENSOANP00000000449 KH 14 51
ENSOANP00000000449 KH 78 142
ENSOANP00000000449 KH 167 229
ENSOANP00000000449 KH 269 334

Links

Other KH family RBPs
Other Ornithorhynchus anatinus RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI61696 Xenopus laevis AAI61696 I 0.814
AAI69923 Xenopus laevis AAI69923 I 0.818
AAN77160 Xenopus laevis AAN77160 I 0.818
Ame_R016412 Ailuropoda melanoleuca Ame_R016412 I 0.891
ENSPPYG00000009454 Pongo pygmaeus ENSPPYG00000009454 I 0.891
ENSPPYG00000019172 Pongo pygmaeus ENSPPYG00000019172 I 0.760
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.711
KHSRP Ochotona princeps ENSOPRG00000010594 I 0.884
KHSRP Oryzias latipes ENSORLG00000011882 I 0.717
KHSRP Procavia capensis ENSPCAG00000000246 I 0.931
KHSRP Pan troglodytes ENSPTRG00000010364 I 0.891
KHSRP Pteropus vampyrus ENSPVAG00000007251 I 0.888
KHSRP Sus scrofa ENSSSCG00000013538 I 0.891
KHSRP Spermophilus tridecemlineatus ENSSTOG00000002371 I 0.891
KHSRP Tetraodon nigroviridis ENSTNIG00000014067 I 0.705
KHSRP Takifugu rubripes ENSTRUG00000010395 I 0.713
KHSRP Tursiops truncatus ENSTTRG00000010390 I 0.891
khsrp Xenopus tropicalis ENSXETG00000021862 I 0.729
Khsrp Mus musculus ENSMUSG00000007670 I 0.888
KHSRP Monodelphis domestica ENSMODG00000001952 I 0.826
KHSRP Macaca mulatta ENSMMUG00000005597 I 0.891
KHSRP Canis familiaris ENSCAFG00000018667 I 0.891
KHSRP Callithrix jacchus ENSCJAG00000016627 I 0.909
KHSRP Cavia porcellus ENSCPOG00000005140 I 0.891
KHSRP Danio rerio ENSDARG00000026489 I 0.806
KHSRP Dasypus novemcinctus ENSDNOG00000009590 I 0.801
Khsrp Dipodomys ordii ENSDORG00000002447 I 0.888
KHSRP Echinops telfairi ENSETEG00000004793 I 0.787
KHSRP Felis catus ENSFCAG00000003731 I 0.891
KHSRP Homo sapiens ENSG00000088247 D 0.891
KHSRP Myotis lucifugus ENSMLUG00000015543 I 0.935
KHSRP Microcebus murinus ENSMICG00000007863 I 0.876
KHSRP Macropus eugenii ENSMEUG00000016601 I 0.845
KHSRP Loxodonta africana ENSLAFG00000002426 I 0.888
KHSRP Gorilla gorilla ENSGGOG00000007028 I 0.891
KHSRP Gasterosteus aculeatus ENSGACG00000018990 I 0.756
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.775
KHSRP Anolis carolinensis ENSACAG00000015398 I 0.888
LOC100065608 Equus caballus ENSECAG00000018305 I 0.891
LOC505564 Bos taurus ENSBTAG00000021018 I 0.891