CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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KHDRBS2
(
Tursiops truncatus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSTTRG00000005591
T19707_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
KHDRBS2
M176_0.6
Homo sapiens
RAUAAAM
RNAcompete
Ray et al.(2013)
RNCMPT00185
1.000
KHDRBS3
M033_0.6
Homo sapiens
AUAAAV
RNAcompete
Ray et al.(2013)
RNCMPT00034
0.857
KHDRBS1
M160_0.6
Homo sapiens
AUAAAAV
RNAcompete
Ray et al.(2013)
RNCMPT00169
0.776
Khdrbs1
M060_0.6
Mus musculus
UAAAAVV
RNAcompete
Ray et al.(2013)
RNCMPT00062
0.776
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000005275
KH
61
141
SERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPP
Links
Other
KH
family RBPs
Other
Tursiops truncatus
RBPs
113 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSPPYG00000001271
Pongo pygmaeus
ENSPPYG00000001271
N
0.000
LOC100406727
Callithrix jacchus
ENSCJAG00000016724
N
0.000
RAVER2
Anolis carolinensis
ENSACAG00000008443
N
0.000
RAVER2
Ornithorhynchus anatinus
ENSOANG00000008327
N
0.000
RAVER2
Oryctolagus cuniculus
ENSOCUG00000006221
N
0.000
RAVER2
Otolemur garnettii
ENSOGAG00000011157
N
0.000
RAVER2
Pan troglodytes
ENSPTRG00000000824
N
0.000
RAVER2
Pteropus vampyrus
ENSPVAG00000007172
N
0.000
Raver2
Rattus norvegicus
ENSRNOG00000023812
N
0.000
RAVER2
Tupaia belangeri
ENSTBEG00000009004
N
0.000
RAVER2
Taeniopygia guttata
ENSTGUG00000009973
N
0.000
Raver2
Mus musculus
ENSMUSG00000035275
N
0.000
RAVER2
Monodelphis domestica
ENSMODG00000001242
N
0.000
RAVER2
Macaca mulatta
ENSMMUG00000018565
N
0.000
RAVER2
Bos taurus
ENSBTAG00000030686
N
0.000
RAVER2
Canis familiaris
ENSCAFG00000018617
N
0.000
Raver2
Dipodomys ordii
ENSDORG00000002498
N
0.000
RAVER2
Equus caballus
ENSECAG00000022014
N
0.000
RAVER2
Homo sapiens
ENSG00000162437
N
0.000
RAVER2
Gorilla gorilla
ENSGGOG00000016447
N
0.000
RAVER2
Loxodonta africana
ENSLAFG00000012508
N
0.000
RAVER2
Macropus eugenii
ENSMEUG00000012740
N
0.000
RAVER2
Meleagris gallopavo
ENSMGAG00000011806
N
0.000
RAVER2
Tarsius syrichta
ENSTSYG00000006019
N
0.000