HNRNPD (Anolis carolinensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSACAG00000010342 T34676_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPAB
M301_0.6 		Homo sapiens Sequence logo not available ACAAAGACAAA SELEX
Cook et al.(2011)
39_12419250 		0.769
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000010205 RRM 27 96
ENSACAP00000010205 RRM 112 183

Links

Other RRM family RBPs
Other Anolis carolinensis RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A4IF81_BOVIN Bos taurus ENSBTAG00000014804 I 0.720
A5D9H5_BOVIN Bos taurus ENSBTAG00000013952 I 0.965
AAH43814 Xenopus laevis AAH43814 I 0.741
AAH74212 Xenopus laevis AAH74212 I 0.741
AAH97855 Xenopus laevis AAH97855 I 0.915
AAU25946 Xenopus laevis AAU25946 I 0.915
ABV54637 Xenopus laevis ABV54637 I 0.741
Ame_R000242 Ailuropoda melanoleuca Ame_R000242 I 0.720
Ame_R000243 Ailuropoda melanoleuca Ame_R000243 I 0.972
Ame_R012484 Ailuropoda melanoleuca Ame_R012484 I 0.762
D3ZN89_RAT Rattus norvegicus ENSRNOG00000002270 I 0.720
ENSCAFG00000008940 Canis familiaris ENSCAFG00000008940 I 0.720
ENSCHOG00000000160 Choloepus hoffmanni ENSCHOG00000000160 I 0.720
ENSCJAG00000032456 Callithrix jacchus ENSCJAG00000032456 I 0.741
ENSCPOG00000015619 Cavia porcellus ENSCPOG00000015619 I 0.720
ENSDNOG00000003887 Dasypus novemcinctus ENSDNOG00000003887 I 0.720
ENSDORG00000000968 Dipodomys ordii ENSDORG00000000968 I 0.720
ENSECAG00000018242 Equus caballus ENSECAG00000018242 I 0.762
ENSLAFG00000008612 Loxodonta africana ENSLAFG00000008612 I 0.720
ENSMEUG00000011454 Macropus eugenii ENSMEUG00000011454 I 0.720
ENSMODG00000006825 Monodelphis domestica ENSMODG00000006825 I 0.706
ENSMODG00000011916 Monodelphis domestica ENSMODG00000011916 I 0.720
ENSPPYG00000014885 Pongo pygmaeus ENSPPYG00000014885 I 0.965
ENSPPYG00000014886 Pongo pygmaeus ENSPPYG00000014886 I 0.720
ENSPPYG00000016107 Pongo pygmaeus ENSPPYG00000016107 I 0.748
HNRDL_CHICK Gallus gallus ENSGALG00000023199 I 0.713
HNRNPAB Meleagris gallopavo ENSMGAG00000007727 I 0.755
HNRNPAB Macropus eugenii ENSMEUG00000007909 I 0.797
HNRNPAB Loxodonta africana ENSLAFG00000001189 I 0.762
HNRNPAB Ornithorhynchus anatinus ENSOANG00000004998 I 0.790
HNRNPAB Pteropus vampyrus ENSPVAG00000016742 I 0.734
HNRNPAB Ochotona princeps ENSOPRG00000002546 I 0.755
HNRNPAB Oryctolagus cuniculus ENSOCUG00000026424 I 0.757
HNRNPAB Oryzias latipes ENSORLG00000005327 I 0.713
HNRNPAB Macaca mulatta ENSMMUG00000003996 I 0.762
HNRNPAB Procavia capensis ENSPCAG00000006760 I 0.748
Hnrnpab Mus musculus ENSMUSG00000020358 I 0.748
HNRNPAB Monodelphis domestica ENSMODG00000004217 I 0.797
Hnrnpab Rattus norvegicus ENSRNOG00000003645 I 0.748
HNRNPAB Gorilla gorilla ENSGGOG00000011692 I 0.769
HNRNPAB Canis familiaris ENSCAFG00000000241 I 0.755
HNRNPAB Anolis carolinensis ENSACAG00000016946 I 0.790
HNRNPAB Cavia porcellus ENSCPOG00000025972 I 0.762
hnrnpab Danio rerio ENSDARG00000007960 I 0.734
HNRNPAB Danio rerio ENSDARG00000017568 I 0.748
HNRNPAB Dasypus novemcinctus ENSDNOG00000013820 I 0.769
hnrnpab Xenopus tropicalis ENSXETG00000003836 I 0.755
HNRNPAB Homo sapiens ENSG00000197451 D 0.769
HNRNPAB Gasterosteus aculeatus ENSGACG00000018116 I 0.762
HNRNPAB Taeniopygia guttata ENSTGUG00000001168 I 0.755
HNRNPD Oryzias latipes ENSORLG00000001833 I 0.860
HNRNPD Vicugna pacos ENSVPAG00000004374 I 0.972
HNRNPD Taeniopygia guttata ENSTGUG00000002858 I 0.965
HNRNPD Ochotona princeps ENSOPRG00000009336 I 0.965
HNRNPD Sorex araneus ENSSARG00000006883 I 0.944
HNRNPD Otolemur garnettii ENSOGAG00000004075 N 0.796
HNRNPD Pteropus vampyrus ENSPVAG00000000003 I 0.965
HNRNPD Spermophilus tridecemlineatus ENSSTOG00000013970 I 0.965
HNRNPD Tupaia belangeri ENSTBEG00000002327 N 0.887
HNRNPD Procavia capensis ENSPCAG00000002182 I 0.923
hnrnpd Xenopus tropicalis ENSXETG00000012569 I 0.923
HNRNPD Tursiops truncatus ENSTTRG00000007592 I 0.965
HNRNPD Tarsius syrichta ENSTSYG00000010395 I 0.972
HNRNPD Takifugu rubripes ENSTRUG00000018450 I 0.846
HNRNPD Tetraodon nigroviridis ENSTNIG00000013499 I 0.853
HNRNPD Pan troglodytes ENSPTRG00000016215 I 0.972
HNRNPD Canis familiaris ENSCAFG00000025045 I 0.972
HNRNPD Erinaceus europaeus ENSEEUG00000007552 I 0.944
HNRNPD Myotis lucifugus ENSMLUG00000010628 I 0.944
HNRNPD Microcebus murinus ENSMICG00000010984 I 0.972
HNRNPD Echinops telfairi ENSETEG00000016709 I 0.965
HNRNPD Homo sapiens ENSG00000138668 I 0.972
HNRNPD Meleagris gallopavo ENSMGAG00000008051 I 0.965
HNRNPD Gasterosteus aculeatus ENSGACG00000015669 N 0.860
HNRNPD Gorilla gorilla ENSGGOG00000026760 I 0.972
HNRNPD Macaca mulatta ENSMMUG00000014030 I 0.972
Hnrnpd Dipodomys ordii ENSDORG00000012507 I 0.965
HNRNPD Choloepus hoffmanni ENSCHOG00000000045 I 0.965
HNRNPD Loxodonta africana ENSLAFG00000016483 I 0.972
HNRNPD Monodelphis domestica ENSMODG00000011898 I 0.958
Hnrnpd Mus musculus ENSMUSG00000000568 I 0.965
HNRNPD Ornithorhynchus anatinus ENSOANG00000001932 I 0.979
hnrnpd Danio rerio ENSDARG00000059246 I 0.888
HNRNPD Oryctolagus cuniculus ENSOCUG00000001357 I 0.972
Hnrpd Rattus norvegicus ENSRNOG00000002292 I 0.958
HNRPDL Tupaia belangeri ENSTBEG00000002817 I 0.720
HNRPDL Tursiops truncatus ENSTTRG00000001793 I 0.720
HNRPDL Homo sapiens ENSG00000152795 I 0.720
HNRPDL Erinaceus europaeus ENSEEUG00000004301 I 0.706
HNRPDL Spermophilus tridecemlineatus ENSSTOG00000013979 I 0.720
HNRPDL Taeniopygia guttata ENSTGUG00000002850 I 0.713
HNRPDL Ochotona princeps ENSOPRG00000007178 I 0.720
Hnrpdl Mus musculus ENSMUSG00000029328 I 0.720
HNRPDL Macaca mulatta ENSMMUG00000015777 I 0.720
HNRPDL Procavia capensis ENSPCAG00000011543 I 0.720
HNRPDL Myotis lucifugus ENSMLUG00000014452 I 0.706
HNRPDL Pan troglodytes ENSPTRG00000016217 I 0.720
HNRPDL Microcebus murinus ENSMICG00000001445 I 0.720
HNRPDL Ornithorhynchus anatinus ENSOANG00000004651 I 0.720
HNRPDL Meleagris gallopavo ENSMGAG00000008033 I 0.713
HNRPDL Gorilla gorilla ENSGGOG00000003714 I 0.720
HNRPDL Oryctolagus cuniculus ENSOCUG00000013805 I 0.720
LOC100060733 Equus caballus ENSECAG00000009344 I 0.972
LOC100397832 Callithrix jacchus ENSCJAG00000031195 I 0.972
LOC100400250 Callithrix jacchus ENSCJAG00000015165 I 0.972
LOC100404672 Callithrix jacchus ENSCJAG00000005154 I 0.713
LOC100412686 Callithrix jacchus ENSCJAG00000015197 I 0.720
Q3ZC44_BOVIN Bos taurus ENSBTAG00000013627 I 0.762
Q5ZIH1_CHICK Gallus gallus ENSGALG00000011184 I 0.965
Q6X9Z3_HORSE Equus caballus ENSECAG00000022692 I 0.720
Q90626_CHICK Gallus gallus ENSGALG00000014381 I 0.755
XR_022913.1 Pan troglodytes ENSPTRG00000017601 I 0.769