CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF1
(
Microcebus murinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMICG00000007157
T38513_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000006522
RRM
8
70
VETSEKDLRELFEQYAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGM
ENSMICP00000006522
RRM
92
160
LFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCS
ENSMICP00000006522
RRM
385
455
LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Microcebus murinus
RBPs
87 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A7MB95_BOVIN
Bos taurus
ENSBTAG00000002520
N
0.948
Ame_R009875
Ailuropoda melanoleuca
Ame_R009875
N
0.948
Celf1
Mus musculus
ENSMUSG00000005506
N
0.938
CELF1
Ornithorhynchus anatinus
ENSOANG00000007896
N
0.938
CELF1
Oryctolagus cuniculus
ENSOCUG00000001311
N
0.948
CELF1
Ochotona princeps
ENSOPRG00000003239
N
0.934
CELF1
Procavia capensis
ENSPCAG00000002631
N
0.910
CELF1
Pan troglodytes
ENSPTRG00000003568
N
0.806
CELF1
Sorex araneus
ENSSARG00000003207
N
0.806
CELF1
Tupaia belangeri
ENSTBEG00000005140
N
0.801
CELF1
Tursiops truncatus
ENSTTRG00000014157
N
0.948
CELF1
Vicugna pacos
ENSVPAG00000000336
N
0.948
CELF1
Monodelphis domestica
ENSMODG00000019913
N
0.938
CELF1
Macaca mulatta
ENSMMUG00000011657
N
0.948
CELF1
Anolis carolinensis
ENSACAG00000002114
N
0.938
CELF1
Canis familiaris
ENSCAFG00000008452
N
0.948
CELF1
Cavia porcellus
ENSCPOG00000007871
N
0.948
CELF1
Dasypus novemcinctus
ENSDNOG00000009523
N
0.791
Celf1
Dipodomys ordii
ENSDORG00000013721
N
0.934
CELF1
Equus caballus
ENSECAG00000007741
N
0.948
CELF1
Loxodonta africana
ENSLAFG00000003484
N
0.948
CELF1
Macropus eugenii
ENSMEUG00000007763
N
0.938
CELF1
Erinaceus europaeus
ENSEEUG00000009782
N
0.806
CELF1
Homo sapiens
ENSG00000149187
N
0.948
CELF2
Tursiops truncatus
ENSTTRG00000014665
N
0.717
CELF2
Procavia capensis
ENSPCAG00000010882
N
0.736
CELF2
Macropus eugenii
ENSMEUG00000015276
N
0.731
Cugbp1
Rattus norvegicus
ENSRNOG00000010379
N
0.938
ENSPPYG00000003302
Pongo pygmaeus
ENSPPYG00000003302
N
0.938
LOC100392717
Callithrix jacchus
ENSCJAG00000020133
N
0.948