PTBP2 (Microcebus murinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMICG00000008543 T38525_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PTBP1
M303_0.6 		Homo sapiens Sequence logo not available UCUU SELEX
Cook et al.(2011)
46_9214659 		0.720
PTBP1
M228_0.6 		Homo sapiens HYUUUYU RNAcompete
Ray et al.(2013)
RNCMPT00269 		0.720
PTBP1
M227_0.6 		Homo sapiens HYUUUYU RNAcompete
Ray et al.(2013)
RNCMPT00268 		0.720
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000007779 RRM 56 112
ENSMICP00000007779 RRM 178 233
ENSMICP00000007779 RRM 348 406
ENSMICP00000007779 RRM 457 521

Links

Other RRM family RBPs
Other Microcebus murinus RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R002925 Ailuropoda melanoleuca Ame_R002925 I 0.914
ENSPPYG00000001132 Pongo pygmaeus ENSPPYG00000001132 I 0.910
ENSPPYG00000009289 Pongo pygmaeus ENSPPYG00000009289 I 0.720
LOC100057336 Equus caballus ENSECAG00000015783 I 0.907
PTBP1 Homo sapiens ENSG00000011304 D 0.720
PTBP1 Meleagris gallopavo ENSMGAG00000003503 I 0.712
PTBP1 Sus scrofa ENSSSCG00000013421 I 0.712
PTBP1 Macropus eugenii ENSMEUG00000006710 I 0.708
PTBP1 Pteropus vampyrus ENSPVAG00000008288 I 0.700
PTBP1 Loxodonta africana ENSLAFG00000027110 I 0.715
PTBP1 Equus caballus ENSECAG00000018845 I 0.700
PTBP1 Macaca mulatta ENSMMUG00000016450 I 0.746
PTBP1 Taeniopygia guttata ENSTGUG00000000641 I 0.708
PTBP1 Cavia porcellus ENSCPOG00000025512 I 0.704
PTBP1 Callithrix jacchus ENSCJAG00000020162 I 0.712
PTBP1 Monodelphis domestica ENSMODG00000006302 I 0.708
PTBP1 Canis familiaris ENSCAFG00000019693 I 0.716
PTBP2 Oryzias latipes ENSORLG00000019191 I 0.750
PTBP2 Oryzias latipes ENSORLG00000013557 I 0.768
PTBP2 Pan troglodytes ENSPTRG00000000987 I 0.914
Ptbp2 Rattus norvegicus ENSRNOG00000010827 I 0.910
PTBP2 Spermophilus tridecemlineatus ENSSTOG00000011727 I 0.910
PTBP2 Danio rerio ENSDARG00000015901 I 0.781
PTBP2 Taeniopygia guttata ENSTGUG00000005558 I 0.891
PTBP2 Tetraodon nigroviridis ENSTNIG00000018950 I 0.787
PTBP2 Tarsius syrichta ENSTSYG00000002576 I 0.914
PTBP2 Tursiops truncatus ENSTTRG00000012904 I 0.914
PTBP2 Vicugna pacos ENSVPAG00000002841 I 0.914
PTBP2 Oryctolagus cuniculus ENSOCUG00000017608 I 0.914
PTBP2 Ornithorhynchus anatinus ENSOANG00000004656 I 0.914
Ptbp2 Mus musculus ENSMUSG00000028134 I 0.914
PTBP2 Canis familiaris ENSCAFG00000020080 I 0.914
PTBP2 Cavia porcellus ENSCPOG00000003762 I 0.914
PTBP2 Dasypus novemcinctus ENSDNOG00000017687 N 0.861
Ptbp2 Dipodomys ordii ENSDORG00000011260 N 0.767
PTBP2 Homo sapiens ENSG00000117569 I 0.914
PTBP2 Gasterosteus aculeatus ENSGACG00000000940 I 0.736
PTBP2 Gasterosteus aculeatus ENSGACG00000014892 I 0.757
PTBP2 Anolis carolinensis ENSACAG00000005600 I 0.891
PTBP2 Gorilla gorilla ENSGGOG00000000659 I 0.914
PTBP2 Loxodonta africana ENSLAFG00000017343 I 0.914
PTBP2 Meleagris gallopavo ENSMGAG00000007308 I 0.906
PTBP2 Myotis lucifugus ENSMLUG00000002522 I 0.895
PTBP2 Macaca mulatta ENSMMUG00000016130 I 0.914
PTBP2 Monodelphis domestica ENSMODG00000004211 I 0.910
Q5F456_CHICK Gallus gallus ENSGALG00000001962 I 0.712
Q9YI60_CHICK Gallus gallus ENSGALG00000005552 I 0.906
XR_025154.1 Pan troglodytes ENSPTRG00000010165 I 0.720