RBM39 (Tursiops truncatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTTRG00000017039 T42686_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000016153 RRM 155 223
ENSTTRP00000016153 RRM 252 322
ENSTTRP00000016153 RRM 445 502

Links

Other RRM family RBPs
Other Tursiops truncatus RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A5D7M4_BOVIN Bos taurus ENSBTAG00000009126 I 0.000
AAA49716 Xenopus laevis AAA49716 I 0.000
AAI55915 Xenopus laevis AAI55915 I 0.000
AAI69704 Xenopus laevis AAI69704 I 0.000
Ame_R016025 Ailuropoda melanoleuca Ame_R016025 I 0.000
Ame_R016026 Ailuropoda melanoleuca Ame_R016026 N 0.000
Ame_R019252 Ailuropoda melanoleuca Ame_R019252 I 0.000
CSDA Loxodonta africana ENSLAFG00000017247 I 0.000
CSDA Gorilla gorilla ENSGGOG00000001352 I 0.000
CSDA Spermophilus tridecemlineatus ENSSTOG00000002108 I 0.000
CSDA Tursiops truncatus ENSTTRG00000008045 I 0.000
CSDA Felis catus ENSFCAG00000018959 I 0.000
CSDA Oryctolagus cuniculus ENSOCUG00000001889 I 0.000
ENSCJAG00000031891 Callithrix jacchus ENSCJAG00000031891 I 0.000
ENSETEG00000004125 Echinops telfairi ENSETEG00000004125 I 0.000
ENSGGOG00000004758 Gorilla gorilla ENSGGOG00000004758 I 0.000
ENSGGOG00000023581 Gorilla gorilla ENSGGOG00000023581 I 0.000
ENSOCUG00000021258 Oryctolagus cuniculus ENSOCUG00000021258 N 0.000
ENSOCUG00000022716 Oryctolagus cuniculus ENSOCUG00000022716 N 0.000
ENSOCUG00000024588 Oryctolagus cuniculus ENSOCUG00000024588 N 0.000
ENSOCUG00000026608 Oryctolagus cuniculus ENSOCUG00000026608 N 0.000
ENSSARG00000007896 Sorex araneus ENSSARG00000007896 I 0.000
LOC100072964 Equus caballus ENSECAG00000009996 I 0.000
LOC100403904 Callithrix jacchus ENSCJAG00000016581 I 0.000
P21574 Xenopus laevis P21574 I 0.000
XR_022686.1 Pan troglodytes ENSPTRG00000008673 I 0.000
YB-1 Homo sapiens ENSG00000065978 D 0.000
YBOX1_CHICK Gallus gallus ENSGALG00000004848 I 0.000
YBOX1_RABIT Oryctolagus cuniculus ENSOCUG00000028047 I 0.000
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.000
YBX1 Loxodonta africana ENSLAFG00000007597 I 0.000
YBX1 Tupaia belangeri ENSTBEG00000015642 N 0.000
YBX1 Tursiops truncatus ENSTTRG00000001353 I 0.000
YBX1 Felis catus ENSFCAG00000015376 N 0.000
Ybx1 Dipodomys ordii ENSDORG00000016627 N 0.000
YBX1 Procavia capensis ENSPCAG00000008397 I 0.000
YBX1 Macropus eugenii ENSMEUG00000009893 N 0.000
YBX2 Monodelphis domestica ENSMODG00000017596 I 0.000
ybx2 Xenopus tropicalis ENSXETG00000025267 N 0.000
YBX2 Microcebus murinus ENSMICG00000012453 I 0.000
YBX2 Homo sapiens ENSG00000006047 D 0.000
YBX2 Oryctolagus cuniculus ENSOCUG00000015064 I 0.000
Ybx2 Mus musculus ENSMUSG00000018554 I 0.000
YBX2 Cavia porcellus ENSCPOG00000009543 I 0.000
YBX2 Canis familiaris ENSCAFG00000016128 I 0.000
YBX2 Procavia capensis ENSPCAG00000008019 I 0.000
YBX2 Macaca mulatta ENSMMUG00000022712 I 0.000
YBX2 Tupaia belangeri ENSTBEG00000001266 I 0.000
YBX2 Ochotona princeps ENSOPRG00000013773 I 0.000
YBX2 Pteropus vampyrus ENSPVAG00000005050 N 0.000
Ybx2 Rattus norvegicus ENSRNOG00000017117 I 0.000
YBX2 Sorex araneus ENSSARG00000000488 I 0.000
YBX2 Otolemur garnettii ENSOGAG00000004392 I 0.000
YBX2 Gorilla gorilla ENSGGOG00000007399 I 0.000
YBX2 Loxodonta africana ENSLAFG00000014006 I 0.000
YBX2 Sus scrofa ENSSSCG00000017938 I 0.000
ybx2-a Xenopus laevis AAI69706 D 0.000