SB03G027920 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb03g027920 T45960_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb03g027920.1 RRM 16 84
Sb03g027920.1 RRM 104 175

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29629.m001425 Ricinus communis 29629.m001425 N 0.730
AC186319.4_FG002 Zea mays AC186319.4_FG002 N 0.732
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.702
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.723
BGIOSIBCE027406 Oryza indica BGIOSIBCE027406 N 0.915
BRADI3G20700 Brachypodium distachyon BRADI3G20700 N 0.865
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.745
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.752
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.730
Glyma13g11650.1 Glycine max Glyma13g11650.1 N 0.716
GRMZM2G050218 Zea mays GRMZM2G050218 N 0.702
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.716
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.759
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.716
LOC_Os08g23120 Oryza sativa LOC_Os08g23120 N 0.915
MDP0000191633 Malus x domestica MDP0000191633 N 0.716
MDP0000202850 Malus x domestica MDP0000202850 N 0.723
MDP0000220851 Malus x domestica MDP0000220851 N 0.716
PDK_20s1371981g001 Phoenix dactylifera PDK_20s1371981g001 N 0.771
PK22392.1 Cannabis sativa PK22392.1 N 0.723
ppa006963m Prunus persica ppa006963m N 0.723
ppa007812m Prunus persica ppa007812m N 0.709