MDP0000191633 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000191633 T57413_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000191633 RRM 63 131
MDP0000191633 RRM 151 221

Links

Other RRM family RBPs
Other Malus x domestica RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000220851 Malus x domestica MDP0000220851 N 0.986
MDP0000202850 Malus x domestica MDP0000202850 N 0.964
ppa006963m Prunus persica ppa006963m N 0.943
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.879
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.864
PK22392.1 Cannabis sativa PK22392.1 N 0.864
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.857
29629.m001425 Ricinus communis 29629.m001425 N 0.857
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.850
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.836
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.836
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.836
XM_002882764.1 Arabidopsis lyrata fgenesh2_kg.3__1405__AT3G13224.1 N 0.821
mgf019396m Mimulus guttatus mgf019396m N 0.814
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.800
ppa007812m Prunus persica ppa007812m N 0.793
Glyma13g11650.1 Glycine max Glyma13g11650.1 N 0.793
GSVIVG00030120001 Vitis vinifera GSVIVG00030120001 N 0.779
Glyma19g00530.1 Glycine max Glyma19g00530.1 N 0.764
LOC_Os08g23120 Oryza sativa LOC_Os08g23120 N 0.759
BGIOSIBCE027406 Oryza indica BGIOSIBCE027406 N 0.759
Glyma16g07660.1 Glycine max Glyma16g07660.1 N 0.757
cassava897.valid.m1 Manihot esculenta cassava897.valid.m1 N 0.757
Glyma05g09040.1 Glycine max Glyma05g09040.1 N 0.757
Glyma19g10300.1 Glycine max Glyma19g10300.1 N 0.757
chr2.LjT32G18.130.nc Lotus japonicus chr2.LjT32G18.130.nc N 0.750
MDP0000288646 Malus x domestica MDP0000288646 N 0.743
ppa007179m Prunus persica ppa007179m N 0.743
MDP0000908645 Malus x domestica MDP0000908645 N 0.743
Medtr3g106660 Medicago truncatula Medtr3g106660 N 0.736
PDK_20s1363571g001 Phoenix dactylifera PDK_20s1363571g001 N 0.736
PK13311.1 Cannabis sativa PK13311.1 N 0.729
29917.m002004 Ricinus communis 29917.m002004 N 0.729
B9GI65_POPTR Populus trichocarpa POPTR_0001s35360 N 0.721
GSVIVG00032402001 Vitis vinifera GSVIVG00032402001 N 0.721
SB03G027920 Sorghum bicolor Sb03g027920 N 0.716
MDP0000303054 Malus x domestica MDP0000303054 N 0.714
MDP0000270712 Malus x domestica MDP0000270712 N 0.714
Cucsa.340040 Cucumis sativus Cucsa.340040 N 0.707
GRMZM2G050218 Zea mays GRMZM2G050218 N 0.707