estExt_fgenesh1_pm.C_20437 (Schizophyllum commune)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pm.C_20437 T50705_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_20437 RRM 36 112

Links

Other RRM family RBPs
Other Schizophyllum commune RBPs

63 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_080400 Aspergillus clavatus CADACLAG00007885 N 0.000
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.727
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.740
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.714
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.714
An12g03930 Aspergillus niger CADANGAG00009835 N 0.727
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.000
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.753
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.740
cbc2 Schizosaccharomyces pombe SPBC13A2.01c N 0.701
CHGG_03355 Chaetomium globosum CHGG_03355 N 0.000
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.740
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.740
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.740
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.000
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.740
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.740
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.740
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.753
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.753
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.766
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.779
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.000
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.753
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.000
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.727
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.727
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.740
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.714
FOXG_09405 Fusarium oxysporum FOXG_09405 N 0.000
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.740
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.000
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.740
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.753
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.727
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.727
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.753
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.740
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.740
MCYG_04468 Microsporum canis MCYG_04468 N 0.740
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.727
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.740
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.000
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.714
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.000
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.000
NCU00210 Neurospora crassa NCU00210 N 0.753
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.740
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.740
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.740
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.727
PGTG_01720 Puccinia graminis PGTG_01720 N 0.727
PHUM535920 Pediculus humanus PHUM535920 N 0.727
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.727
PredSwiss_ASS2010_2397.2 Pneumocystis carinii PredSwiss_ASS2010_2397.2 N 0.000
PredSwiss_CON682.3 Pneumocystis carinii PredSwiss_CON682.3 N 0.000
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.740
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.740
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.740
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.000
SPOG_01217 Schizosaccharomyces cryophilus SPOG_01217 N 0.000
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.727
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.753
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.740
TERG_03424 Trichophyton rubrum TERG_03424 N 0.740
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.727
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.714