MKRN1 (Meleagris gallopavo)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSMGAG00000013208 T02853_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000013945 CCCH ZF 1 20
ENSMGAP00000013945 CCCH ZF 28 49
ENSMGAP00000013945 CCCH ZF 142 167
ENSMGAP00000013945 CCCH ZF 300 325

Links

Other CCCH ZF family RBPs
Other Meleagris gallopavo RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.857
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.910
MKRN1 Callithrix jacchus ENSCJAG00000004068 N 0.735
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.847
ENSCPOG00000000948 Cavia porcellus ENSCPOG00000000948 N 0.840
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 0.808
mkrn1 Danio rerio ENSDARG00000041665 N 0.726
LOC100065893 Equus caballus ENSECAG00000017929 N 0.857
MKRN1 Felis catus ENSFCAG00000013043 N 0.847
Q9PTI4_CHICK Gallus gallus ENSGALG00000012852 N 0.930
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 0.808
MKRN1 Homo sapiens ENSG00000133606 N 0.827
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.798
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.743
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.857
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.900
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.779
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.900
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.827
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.812
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.847
MKRN1 Oryzias latipes ENSORLG00000012765 N 0.714
ENSOGAG00000009877 Otolemur garnettii ENSOGAG00000009877 N 0.806
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.817
ENSPPYG00000018057 Pongo pygmaeus ENSPPYG00000018057 N 0.847
ENSPPYG00000020255 Pongo pygmaeus ENSPPYG00000020255 N 0.755
MKRN1 Procavia capensis ENSPCAG00000014683 N 0.875
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.798
MKRN1 Sorex araneus ENSSARG00000013683 N 0.778
MKRN1 Sus scrofa ENSSSCG00000016498 N 0.808
MKRN1 Taeniopygia guttata ENSTGUG00000011669 N 0.979
MKRN1 Tarsius syrichta ENSTSYG00000009996 N 0.796
MKRN1 Tursiops truncatus ENSTTRG00000009528 N 0.808
AAH74368 Xenopus laevis AAH74368 N 0.788
Q6GLT5 Xenopus laevis Q6GLT5 N 0.788