ENSPPYG00000018057 (Pongo pygmaeus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSPPYG00000018057 T03225_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000020261 CCCH ZF 1 19
ENSPPYP00000020261 CCCH ZF 23 48
ENSPPYP00000020261 CCCH ZF 147 172
ENSPPYP00000020261 CCCH ZF 305 330

Links

Other CCCH ZF family RBPs
Other Pongo pygmaeus RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.980
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.827
MKRN1 Callithrix jacchus ENSCJAG00000004068 N 0.779
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.990
ENSCPOG00000000948 Cavia porcellus ENSCPOG00000000948 N 0.950
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 0.923
mkrn1 Danio rerio ENSDARG00000041665 N 0.717
LOC100065893 Equus caballus ENSECAG00000017929 N 0.980
MKRN1 Felis catus ENSFCAG00000013043 N 0.990
Q9PTI4_CHICK Gallus gallus ENSGALG00000012852 N 0.808
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 0.933
MKRN1 Homo sapiens ENSG00000133606 N 0.979
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.904
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.769
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.990
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.817
MKRN1 Meleagris gallopavo ENSMGAG00000013208 N 0.847
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.885
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.817
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.959
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.865
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.969
MKRN1 Oryzias latipes ENSORLG00000012765 N 0.743
ENSOGAG00000009877 Otolemur garnettii ENSOGAG00000009877 N 0.918
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.923
ENSPPYG00000020255 Pongo pygmaeus ENSPPYG00000020255 N 0.817
MKRN1 Procavia capensis ENSPCAG00000014683 N 0.918
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.894
MKRN1 Sorex araneus ENSSARG00000013683 N 0.899
MKRN1 Sus scrofa ENSSSCG00000016498 N 0.923
MKRN1 Taeniopygia guttata ENSTGUG00000011669 N 0.827
MKRN1 Tarsius syrichta ENSTSYG00000009996 N 0.928
MKRN1 Tursiops truncatus ENSTTRG00000009528 N 0.923
AAH74368 Xenopus laevis AAH74368 N 0.757
Q6GLT5 Xenopus laevis Q6GLT5 N 0.757