UNKL (Takifugu rubripes)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSTRUG00000012086 T03537_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000030585 CCCH ZF 54 77
ENSTRUP00000030585 CCCH ZF 260 285
ENSTRUP00000030586 CCCH ZF 76 99
ENSTRUP00000030586 CCCH ZF 282 306
ENSTRUP00000030587 CCCH ZF 70 93
ENSTRUP00000030587 CCCH ZF 276 302
ENSTRUP00000030588 CCCH ZF 63 86
ENSTRUP00000030588 CCCH ZF 269 294
ENSTRUP00000030589 CCCH ZF 204 229
ENSTRUP00000030590 CCCH ZF 198 215
ENSTRUP00000030590 CCCH ZF 401 427
ENSTRUP00000030591 CCCH ZF 63 86
ENSTRUP00000030591 CCCH ZF 110 127
ENSTRUP00000030591 CCCH ZF 269 294

Links

Other CCCH ZF family RBPs
Other Takifugu rubripes RBPs

91 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s17350g1t1 Acyrtosiphon pisum DGIL_AUG5s17350g1t1 N 0.754
AAEL012456 Aedes aegypti AAEL012456 N 0.824
AAEL014545 Aedes aegypti AAEL014545 N 0.714
Ame_R007986 Ailuropoda melanoleuca Ame_R007986 N 0.804
Aqu1.225680 Amphimedon queenslandica Aqu1.225680 N 0.739
UNK Anolis carolinensis ENSACAG00000007303 N 0.824
AGAP000684 Anopheles gambiae AGAP000684 N 0.824
amel4_ncbi_hmm89035 Apis mellifera amel4_ncbi_hmm89035 N 0.800
UNKL Bos taurus ENSBTAG00000014126 N 0.827
A1A4K6_BOVIN Bos taurus ENSBTAG00000016287 N 0.824
fgenesh2_pg.scaffold_5000153 Branchiostoma floridae fgenesh2_pg.scaffold_5000153 N 0.797
e_gw.394.2.1 Branchiostoma floridae e_gw.394.2.1 N 0.784
Bm1_37725 Brugia malayi Bm1_37725 N 0.714
LOC100390502 Callithrix jacchus ENSCJAG00000014056 N 0.824
UNKL Callithrix jacchus ENSCJAG00000013151 N 0.827
UNK_CANFA Canis familiaris ENSCAFG00000004925 N 0.824
UNK Cavia porcellus ENSCPOG00000012679 N 0.824
UNKL Cavia porcellus ENSCPOG00000011846 N 0.902
ENSCSAVG00000004843 Ciona savignyi ENSCSAVG00000004843 N 0.757
unk Danio rerio ENSDARG00000000935 N 0.745
UNKL Danio rerio ENSDARG00000037838 N 0.941
NCBI_GNO_462100002 Daphnia pulex NCBI_GNO_462100002 N 0.714
Unk Dipodomys ordii ENSDORG00000008133 N 0.824
GK12832 Drosophila willistoni FBgn0214841 N 0.797
UNK Echinops telfairi ENSETEG00000019640 N 0.800
LOC100067623 Equus caballus ENSECAG00000010641 N 0.846
UNK Equus caballus ENSECAG00000024672 N 0.824
UNK Erinaceus europaeus ENSEEUG00000013779 N 0.797
UNK Felis catus ENSFCAG00000005757 N 0.863
UNK Gallus gallus ENSGALG00000002278 N 0.824
UNKL Gallus gallus ENSGALG00000006450 N 0.922
UNK Gasterosteus aculeatus ENSGACG00000005102 N 0.827
UNK Gorilla gorilla ENSGGOG00000009203 N 0.824
UNKL Gorilla gorilla ENSGGOG00000014915 N 0.956
188708 Helobdella robusta 188708 N 0.725
UNKL Homo sapiens ENSG00000059145 N 0.956
UNK Homo sapiens ENSG00000132478 N 0.824
XP_002155288.1 Hydra magnipapillata XP_002155288.1 N 0.732
LOAG_04272 Loa loa LOAG_04272 N 0.714
estExt_Genewise1.C_sca_750115 Lottia gigantea estExt_Genewise1.C_sca_750115 N 0.863
UNKL Loxodonta africana ENSLAFG00000018262 N 0.882
UNK Loxodonta africana ENSLAFG00000022662 N 0.824
ENSMMUG00000006693 Macaca mulatta ENSMMUG00000006693 N 0.889
UNK Macaca mulatta ENSMMUG00000013646 N 0.824
UNK Macropus eugenii ENSMEUG00000004094 N 0.843
UNK Meleagris gallopavo ENSMGAG00000004713 N 0.824
UNKL Meleagris gallopavo ENSMGAG00000006920 N 0.922
UNK Microcebus murinus ENSMICG00000007591 N 0.800
UNK Monodelphis domestica ENSMODG00000007684 N 0.843
UNKL Monodelphis domestica ENSMODG00000016188 N 0.922
Unk Mus musculus ENSMUSG00000020770 N 0.804
Unkl Mus musculus ENSMUSG00000015127 N 0.889
UNK Myotis lucifugus ENSMLUG00000015453 N 0.824
nasonia_NCBI_hmm1068274 Nasonia vitripennis nasonia_NCBI_hmm1068274 N 0.797
e_gw.10.245.1 Nematostella vectensis e_gw.10.245.1 N 0.841
UNK Ochotona princeps ENSOPRG00000012784 N 0.745
SNAPOd2T00019464001 Oikopleura dioica SNAPOd2T00019464001 N 0.804
ENSOANG00000021809 Ornithorhynchus anatinus ENSOANG00000021809 N 0.926
UNK Oryctolagus cuniculus ENSOCUG00000014994 N 0.824
UNKL Oryzias latipes ENSORLG00000005070 N 0.941
UNK Oryzias latipes ENSORLG00000018637 N 0.800
UNKL Otolemur garnettii ENSOGAG00000001437 N 0.926
UNK Otolemur garnettii ENSOGAG00000001922 N 0.739
XR_022366.1 Pan troglodytes ENSPTRG00000007591 N 0.956
UNK Pan troglodytes ENSPTRG00000009656 N 0.824
PHUM219250 Pediculus humanus PHUM219250 N 0.804
ENSPPYG00000006950 Pongo pygmaeus ENSPPYG00000006950 N 0.827
ENSPPYG00000008637 Pongo pygmaeus ENSPPYG00000008637 N 0.824
UNK Procavia capensis ENSPCAG00000004504 N 0.824
UNK Pteropus vampyrus ENSPVAG00000008460 N 0.824
RGD1565247 Rattus norvegicus ENSRNOG00000017598 N 0.933
D4A564_RAT Rattus norvegicus ENSRNOG00000006600 N 0.804
Sjc_0008870 Schistosoma japonicum Sjc_0008870 N 0.757
Smp_154250 Schistosoma mansoni Smp_154250 N 0.757
UNK Spermophilus tridecemlineatus ENSSTOG00000013344 N 0.824
XP_001180099.1 Strongylocentrotus purpuratus XP_001180099.1 N 0.826
XP_789013.2 Strongylocentrotus purpuratus XP_789013.2 N 0.826
UNK Sus scrofa ENSSSCG00000017201 N 0.824
UNK Taeniopygia guttata ENSTGUG00000008279 N 0.824
UNK Takifugu rubripes ENSTRUG00000007192 N 0.804
UNKL Tetraodon nigroviridis ENSTNIG00000018588 N 0.980
UNK Tupaia belangeri ENSTBEG00000016178 N 0.852
UNKL Tursiops truncatus ENSTTRG00000011985 N 0.911
UNK Tursiops truncatus ENSTTRG00000015890 N 0.824
UNK Vicugna pacos ENSVPAG00000011532 N 0.852
WUBG_00870 Wuchereria bancrofti WUBG_00870 N 0.714
AAH46725 Xenopus laevis AAH46725 N 0.843
AAH72265 Xenopus laevis AAH72265 N 0.926
unk Xenopus tropicalis ENSXETG00000012578 N 0.824
unkl Xenopus tropicalis ENSXETG00000021599 N 0.926