BRADI3G40520 (Brachypodium distachyon)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 BRADI3G40520 T24061_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G40520.1 PUF 702 735
BRADI3G40520.1 PUF 738 771
BRADI3G40520.1 PUF 774 808
BRADI3G40520.1 PUF 810 843
BRADI3G40520.1 PUF 846 880
BRADI3G40520.1 PUF 883 918
BRADI3G40520.1 PUF 919 953
BRADI3G40520.1 PUF 964 995

Links

Other PUF family RBPs
Other Brachypodium distachyon RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI4G34110 Brachypodium distachyon BRADI4G34110 N 0.712
PK12245.1 Cannabis sativa PK12245.1 N 0.703
Cucsa.149730 Cucumis sativus Cucsa.149730 N 0.742
MDP0000313902 Malus x domestica MDP0000313902 N 0.723
MDP0000277305 Malus x domestica MDP0000277305 N 0.730
MDP0000265231 Malus x domestica MDP0000265231 N 0.714
cassava9350.m1 Manihot esculenta cassava9350.m1 N 0.715
cassava43126.valid.m1 Manihot esculenta cassava43126.valid.m1 N 0.703
BGIOSIBCE028530 Oryza indica BGIOSIBCE028530 N 0.907
LOC_Os09g32210 Oryza sativa LOC_Os09g32210 N 0.714
LOC_Os08g40830 Oryza sativa LOC_Os08g40830 N 0.907
B9HK27_POPTR Populus trichocarpa POPTR_0008s00490 N 0.725
ppa016404m Prunus persica ppa016404m N 0.715
ppa000898m Prunus persica ppa000898m N 0.707
30169.m006300 Ricinus communis 30169.m006300 N 0.722
gw1.2.45.1 Selaginella moellendorfii gw1.2.45.1 N 0.710
Sb07g026995 Sorghum bicolor Sb07g026995 N 0.903
GSVIVG00031557001 Vitis vinifera GSVIVG00031557001 N 0.710
GSVIVG00029553001 Vitis vinifera GSVIVG00029553001 N 0.739
GRMZM2G449123 Zea mays GRMZM2G449123 N 0.868
GRMZM2G035118 Zea mays GRMZM2G035118 N 0.896