TIA1 (Gasterosteus aculeatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGACG00000013294 T37504_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.878
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.878
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000017570 RRM 50 114
ENSGACP00000017578 RRM 2 60
ENSGACP00000017578 RRM 80 150
ENSGACP00000017578 RRM 188 252

Links

Other RRM family RBPs
Other Gasterosteus aculeatus RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.887
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.883
TIAL1 Anolis carolinensis ENSACAG00000016986 I 0.785
A1A4R7_BOVIN Bos taurus ENSBTAG00000004080 I 0.800
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.883
gw.406.24.1 Branchiostoma floridae gw.406.24.1 I 0.725
estExt_fgenesh2_pg.C_1430023 Branchiostoma floridae estExt_fgenesh2_pg.C_1430023 I 0.722
TIAL1 Callithrix jacchus ENSCJAG00000019682 I 0.769
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.878
TIAL1 Canis familiaris ENSCAFG00000012171 I 0.739
TIA1 Canis familiaris ENSCAFG00000003341 I 0.887
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.878
tial1 Danio rerio ENSDARG00000009525 I 0.790
tia1l Danio rerio ENSDARG00000026476 I 0.800
tia1 Danio rerio ENSDARG00000052536 I 0.883
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.887
Tial1 Dipodomys ordii ENSDORG00000010683 I 0.703
Tia1 Dipodomys ordii ENSDORG00000008601 I 0.815
TIA1 Echinops telfairi ENSETEG00000010021 I 0.878
TIAL1 Equus caballus ENSECAG00000009970 I 0.800
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.878
Q800W1_CHICK Gallus gallus ENSGALG00000009427 I 0.739
TIA1 Gasterosteus aculeatus ENSGACG00000015800 I 0.844
TIAL1 Gasterosteus aculeatus ENSGACG00000003365 I 0.786
TIAL1 Gorilla gorilla ENSGGOG00000001816 I 0.712
TIA1 Homo sapiens ENSG00000116001 D 0.878
TIAL1 Homo sapiens ENSG00000151923 D 0.800
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.883
TIAL1 Macaca mulatta ENSMMUG00000001472 I 0.800
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.878
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.882
TIAL1 Monodelphis domestica ENSMODG00000008865 I 0.739
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.887
Tial1 Mus musculus ENSMUSG00000030846 I 0.800
Tia1 Mus musculus ENSMUSG00000071337 I 0.873
TIAL1 Ornithorhynchus anatinus ENSOANG00000004896 I 0.769
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.878
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.804
TIA1 Oryzias latipes ENSORLG00000002529 I 0.848
TIAL1 Oryzias latipes ENSORLG00000013798 I 0.766
TIA1 Oryzias latipes ENSORLG00000015642 I 0.902
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.878
TIAL1 Pan troglodytes ENSPTRG00000002996 I 0.739
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.878
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.873
ENSPPYG00000002703 Pongo pygmaeus ENSPPYG00000002703 I 0.739
TIA1 Procavia capensis ENSPCAG00000001859 I 0.738
TIAL1 Procavia capensis ENSPCAG00000003192 I 0.734
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.878
TIAL1 Pteropus vampyrus ENSPVAG00000017585 I 0.739
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.868
Tial1 Rattus norvegicus ENSRNOG00000020271 I 0.739
TIA1 Sorex araneus ENSSARG00000001997 I 0.841
ENSSSCG00000010685 Sus scrofa ENSSSCG00000010685 I 0.800
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.834
TIA1 Takifugu rubripes ENSTRUG00000005456 I 0.844
TIA1 Takifugu rubripes ENSTRUG00000015136 I 0.912
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.700
TIAL1 Tarsius syrichta ENSTSYG00000004348 I 0.739
TIA1 Tetraodon nigroviridis ENSTNIG00000013470 I 0.844
TIA1 Tetraodon nigroviridis ENSTNIG00000011433 I 0.912
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.776
TIAL1 Tursiops truncatus ENSTTRG00000014574 I 0.715
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.878
TIAL1 Vicugna pacos ENSVPAG00000001240 I 0.712
AAH77169 Xenopus laevis AAH77169 I 0.839
AAH80105 Xenopus laevis AAH80105 I 0.854
CAC95018 Xenopus laevis CAC95018 I 0.839
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.859