CELF5 (Sus scrofa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSSCG00000013476 T41503_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.788
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000014323 RRM 1 30
ENSSSCP00000014323 RRM 49 118
ENSSSCP00000014323 RRM 316 386

Links

Other RRM family RBPs
Other Sus scrofa RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh2_pg.C_sca_43000080 Lottia gigantea fgenesh2_pg.C_sca_43000080 N 0.000
PGTG_13387 Puccinia graminis PGTG_13387 N 0.000
Genemark.469_g Serpula lacrymans Genemark.469_g N 0.000
Genemark.4804_g Serpula lacrymans Genemark.4804_g N 0.000
Genemark.6054_g Serpula lacrymans Genemark.6054_g N 0.000
Genemark.6548_g Serpula lacrymans Genemark.6548_g N 0.000
Genemark.697_g Serpula lacrymans Genemark.697_g N 0.000
Genemark.7257_g Serpula lacrymans Genemark.7257_g N 0.000
Genemark.7317_g Serpula lacrymans Genemark.7317_g N 0.000
Genemark.75_g Serpula lacrymans Genemark.75_g N 0.000
Genemark.826_g Serpula lacrymans Genemark.826_g N 0.000
Genemark.3014_g Serpula lacrymans Genemark.3014_g N 0.000
Genemark.291_g Serpula lacrymans Genemark.291_g N 0.000
Genemark.1711_g Serpula lacrymans Genemark.1711_g N 0.000
Genemark.10431_g Serpula lacrymans Genemark.10431_g N 0.000
Genemark.10526_g Serpula lacrymans Genemark.10526_g N 0.000
Genemark.10975_g Serpula lacrymans Genemark.10975_g N 0.000
Genemark.10994_g Serpula lacrymans Genemark.10994_g N 0.000
Genemark.114_g Serpula lacrymans Genemark.114_g N 0.000
Genemark.11813_g Serpula lacrymans Genemark.11813_g N 0.000
Genemark.12031_g Serpula lacrymans Genemark.12031_g N 0.000
Genemark.12199_g Serpula lacrymans Genemark.12199_g N 0.000
Genemark.12634_g Serpula lacrymans Genemark.12634_g N 0.000
Genemark.983_g Serpula lacrymans Genemark.983_g N 0.000