CELF5 (Sus scrofa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSSCG00000013476 T41503_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.788
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000014323 RRM 1 30
ENSSSCP00000014323 RRM 49 118
ENSSSCP00000014323 RRM 316 386

Links

Other RRM family RBPs
Other Sus scrofa RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.801
CELF5 Bos taurus ENSBTAG00000021774 I 0.994
CELF5 Canis familiaris ENSCAFG00000019263 I 0.988
CELF6 Cavia porcellus ENSCPOG00000025842 I 0.826
celf4 Danio rerio ENSDARG00000070045 I 0.854
celf5 Danio rerio ENSDARG00000071375 I 0.716
Celf5 Dipodomys ordii ENSDORG00000005915 I 0.959
CELF5 Echinops telfairi ENSETEG00000016221 I 0.942
CELF5 Equus caballus ENSECAG00000018055 N 0.750
CELF3 Homo sapiens ENSG00000159409 I 0.762
BRUNOL5 Homo sapiens ENSG00000161082 D 0.796
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.706
CELF5 Loxodonta africana ENSLAFG00000026387 N 0.733
CELF3 Macaca mulatta ENSMMUG00000016952 I 0.738
CELF5 Meleagris gallopavo ENSMGAG00000001169 I 0.953
CELF3 Microcebus murinus ENSMICG00000010644 N 0.801
Celf4 Mus musculus ENSMUSG00000024268 I 0.701
CELF5 Myotis lucifugus ENSMLUG00000006471 N 0.744
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.706
CELF5 Oryzias latipes ENSORLG00000004600 I 0.720
CELF5 Otolemur garnettii ENSOGAG00000014161 I 0.965
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.773
CELF5 Procavia capensis ENSPCAG00000002170 I 0.948
CELF5 Pteropus vampyrus ENSPVAG00000014619 I 0.982
BRUNOL5 Taeniopygia guttata ENSTGUG00000000514 I 0.953
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.787
CELF5 Tursiops truncatus ENSTTRG00000009625 I 0.982
ACH69785 Xenopus laevis ACH69785 I 0.739
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.730
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.701