HNRNPR (Taeniopygia guttata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTGUG00000000880 T41840_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSGALG00000000814
M242_0.6 		Gallus gallus MMAAAWY RNAcompete
Ray et al.(2013)
RNCMPT00288 		0.995
ENSXETG00000007102
M243_0.6 		Xenopus tropicalis MAAAAAG RNAcompete
Ray et al.(2013)
RNCMPT00289 		0.910
ENSXETG00000018075
M236_0.6 		Xenopus tropicalis MAAAWWD RNAcompete
Ray et al.(2013)
RNCMPT00281 		0.846
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000000909 RRM 191 259
ENSTGUP00000000909 RRM 272 339
ENSTGUP00000000909 RRM 367 429

Links

Other RRM family RBPs
Other Taeniopygia guttata RBPs

83 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R001024 Ailuropoda melanoleuca Ame_R001024 I 0.975
Ame_R011496 Ailuropoda melanoleuca Ame_R011496 I 0.842
SYNCRIP Anolis carolinensis ENSACAG00000015234 I 0.832
HNRNPR Anolis carolinensis ENSACAG00000017593 I 0.985
A3KMV6_BOVIN Bos taurus ENSBTAG00000016578 I 0.975
A7E355_BOVIN Bos taurus ENSBTAG00000006672 I 0.842
SYNCRIP Callithrix jacchus ENSCJAG00000015352 I 0.842
HNRNPR Callithrix jacchus ENSCJAG00000005512 I 0.975
ENSCJAG00000013031 Callithrix jacchus ENSCJAG00000013031 I 0.858
HNRNPR Canis familiaris ENSCAFG00000013308 I 0.956
SYNCRIP Canis familiaris ENSCAFG00000003024 I 0.842
ENSCPOG00000009653 Cavia porcellus ENSCPOG00000009653 I 0.975
SYNCRIP Cavia porcellus ENSCPOG00000012415 I 0.842
HNRNPR Choloepus hoffmanni ENSCHOG00000005090 I 0.961
syncripl Danio rerio ENSDARG00000026723 I 0.818
syncrip Danio rerio ENSDARG00000040184 I 0.842
SYNCRIP Dasypus novemcinctus ENSDNOG00000018345 I 0.700
Syncrip Dipodomys ordii ENSDORG00000005217 I 0.720
SYNCRIP Echinops telfairi ENSETEG00000020109 I 0.842
HNRNPR Equus caballus ENSECAG00000013733 I 0.975
HNRNPR Erinaceus europaeus ENSEEUG00000010120 I 0.931
HNRNPR Felis catus ENSFCAG00000019123 I 0.710
Q5ZLH7_CHICK Gallus gallus ENSGALG00000015830 I 0.837
ENSGALG00000000814 Gallus gallus ENSGALG00000000814 D 0.995
SYNCRIP Gasterosteus aculeatus ENSGACG00000011665 I 0.847
SYNCRIP Gasterosteus aculeatus ENSGACG00000009124 I 0.837
HNRNPR Gasterosteus aculeatus ENSGACG00000003202 I 0.866
SYNCRIP Gorilla gorilla ENSGGOG00000012898 I 0.842
HNRNPR Gorilla gorilla ENSGGOG00000013250 I 0.975
SYNCRIP Homo sapiens ENSG00000135316 I 0.842
HNRNPR Homo sapiens ENSG00000125944 I 0.975
HNRNPR Loxodonta africana ENSLAFG00000012793 I 0.975
SYNCRIP Loxodonta africana ENSLAFG00000018172 I 0.842
SYNCRIP Macaca mulatta ENSMMUG00000012575 I 0.842
HNRNPR Macaca mulatta ENSMMUG00000010970 I 0.975
HNRNPR Macropus eugenii ENSMEUG00000003769 I 0.825
HNRNPR Meleagris gallopavo ENSMGAG00000001000 I 0.995
SYNCRIP Meleagris gallopavo ENSMGAG00000013690 I 0.837
SYNCRIP Microcebus murinus ENSMICG00000007192 I 0.842
XM_001366708.1 Monodelphis domestica ENSMODG00000018345 I 0.842
HNRNPR Monodelphis domestica ENSMODG00000016144 I 0.980
XM_001362737.1 Monodelphis domestica ENSMODG00000000609 I 0.842
Syncrip Mus musculus ENSMUSG00000032423 I 0.847
Hnrnpr Mus musculus ENSMUSG00000066037 I 0.975
SYNCRIP Myotis lucifugus ENSMLUG00000006919 I 0.842
HNRNPR Myotis lucifugus ENSMLUG00000007582 I 0.911
HNRNPR Ochotona princeps ENSOPRG00000014561 I 0.838
HNRNPR Ornithorhynchus anatinus ENSOANG00000003961 I 0.975
SYNCRIP Ornithorhynchus anatinus ENSOANG00000010099 I 0.832
SYNCRIP Oryctolagus cuniculus ENSOCUG00000000601 I 0.842
HNRNPR Oryctolagus cuniculus ENSOCUG00000006686 I 0.956
SYNCRIP Oryzias latipes ENSORLG00000009190 I 0.842
SYNCRIP Oryzias latipes ENSORLG00000014840 I 0.823
HNRNPR Oryzias latipes ENSORLG00000002515 I 0.854
HNRNPR Otolemur garnettii ENSOGAG00000009179 I 0.946
SYNCRIP Otolemur garnettii ENSOGAG00000001721 I 0.720
XR_022081.1 Pan troglodytes ENSPTRG00000018393 I 0.842
HNRNPR Pan troglodytes ENSPTRG00000000324 I 0.961
ENSPPYG00000016819 Pongo pygmaeus ENSPPYG00000016819 I 0.842
ENSPPYG00000001744 Pongo pygmaeus ENSPPYG00000001744 I 0.975
HNRNPR Procavia capensis ENSPCAG00000010462 I 0.815
SYNCRIP Pteropus vampyrus ENSPVAG00000011888 I 0.842
HNRNPR Pteropus vampyrus ENSPVAG00000014804 I 0.961
ENSRNOG00000033356 Rattus norvegicus ENSRNOG00000033356 I 0.773
Syncrip Rattus norvegicus ENSRNOG00000000204 I 0.847
Hnrnpr Rattus norvegicus ENSRNOG00000011910 I 0.975
HNRNPR Sorex araneus ENSSARG00000001732 I 0.961
SYNCRIP Sorex araneus ENSSARG00000005967 I 0.842
SYNCRIP Sus scrofa ENSSSCG00000004294 I 0.842
SYNCRIP Takifugu rubripes ENSTRUG00000014766 I 0.837
HNRNPR Takifugu rubripes ENSTRUG00000008817 I 0.857
SYNCRIP Takifugu rubripes ENSTRUG00000005365 I 0.813
SYNCRIP Tarsius syrichta ENSTSYG00000013305 I 0.842
HNRNPR Tetraodon nigroviridis ENSTNIG00000017576 I 0.861
SYNCRIP Tetraodon nigroviridis ENSTNIG00000017299 I 0.813
SYNCRIP Tetraodon nigroviridis ENSTNIG00000002821 I 0.828
HNRNPR Tupaia belangeri ENSTBEG00000002251 I 0.961
HNRNPR Tursiops truncatus ENSTTRG00000007752 I 0.887
SYNCRIP Vicugna pacos ENSVPAG00000001061 I 0.842
AAH70529 Xenopus laevis AAH70529 I 0.842
AAI61702 Xenopus laevis AAI61702 I 0.900
ENSXETG00000018075 Xenopus tropicalis ENSXETG00000018075 D 0.837
ENSXETG00000007102 Xenopus tropicalis ENSXETG00000007102 D 0.910