XP_002167624.1 (Hydra magnipapillata)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		XP_002167624.1 T01145_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_002167624.1 CCCH ZF 1 23
XP_002167624.1 RRM 71 128
XP_002167624.1 CCCH ZF 125 150

Links

Other CCCH ZF,RRM family RBPs
Other Hydra magnipapillata RBPs

84 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_002156010.1 Hydra magnipapillata XP_002156010.1 N 0.927
e_gw.121.26.1 Nematostella vectensis e_gw.121.26.1 N 0.832
U2AF1 Vicugna pacos ENSVPAG00000002856 N 0.818
U2AF1 Tupaia belangeri ENSTBEG00000000453 N 0.818
U2AF1 Pteropus vampyrus ENSPVAG00000016992 N 0.818
U2AF1 Myotis lucifugus ENSMLUG00000014756 N 0.818
U2AF1 Spermophilus tridecemlineatus ENSSTOG00000012766 N 0.818
U2af1 Dipodomys ordii ENSDORG00000000211 N 0.818
LOC100057570 Equus caballus ENSECAG00000015558 N 0.811
U2AF1 Ornithorhynchus anatinus ENSOANG00000006463 N 0.811
Ame_R019749 Ailuropoda melanoleuca Ame_R019749 N 0.811
U2AF1 Meleagris gallopavo ENSMGAG00000014587 N 0.811
e_gw.8.588.1 Branchiostoma floridae e_gw.8.588.1 N 0.807
e_gw.8.587.1 Branchiostoma floridae e_gw.8.587.1 N 0.807
AAI08559 Xenopus laevis AAI08559 N 0.805
u2af1 Danio rerio ENSDARG00000015325 N 0.805
U2AF1 Loxodonta africana ENSLAFG00000011460 N 0.796
U2AF1 Pan troglodytes ENSPTRG00000013952 N 0.796
U2AF1 Procavia capensis ENSPCAG00000013413 N 0.796
U2AF1 Monodelphis domestica ENSMODG00000021029 N 0.796
U2af1 Mus musculus ENSMUSG00000061613 N 0.796
U2AF1 Oryzias latipes ENSORLG00000006182 N 0.796
U2AF1 Macaca mulatta ENSMMUG00000022769 N 0.796
U2AF1 Microcebus murinus ENSMICG00000013835 N 0.796
Q98TR0_CHICK Gallus gallus ENSGALG00000016198 N 0.796
U2AF1 Homo sapiens ENSG00000160201 N 0.796
U2AF1 Tetraodon nigroviridis ENSTNIG00000008311 N 0.796
U2AF1 Canis familiaris ENSCAFG00000010572 N 0.796
U2AF1_BOVIN Bos taurus ENSBTAG00000011645 N 0.796
U2AF1 Anolis carolinensis ENSACAG00000017836 N 0.796
U2AF1 Tarsius syrichta ENSTSYG00000006799 N 0.796
U2AF1 Taeniopygia guttata ENSTGUG00000005826 N 0.796
LOC100415206 Callithrix jacchus ENSCJAG00000015843 N 0.796
ENSGACG00000003454 Gasterosteus aculeatus ENSGACG00000003454 N 0.796
U2AF1 Cavia porcellus ENSCPOG00000004893 N 0.796
U2AF1 Echinops telfairi ENSETEG00000002200 N 0.796
e_gw1.49.82.1 Lottia gigantea e_gw1.49.82.1 N 0.791
XP_001191705.1 Strongylocentrotus purpuratus XP_001191705.1 N 0.789
U2AF1L4 Sus scrofa ENSSSCG00000002896 N 0.789
U2af1l4 Rattus norvegicus ENSRNOG00000024497 N 0.789
U2AF1L4 Oryctolagus cuniculus ENSOCUG00000013434 N 0.789
U2AF4_BOVIN Bos taurus ENSBTAG00000023610 N 0.789
U2af1l4 Mus musculus ENSMUSG00000078765 N 0.789
ENSCSAVG00000000329 Ciona savignyi ENSCSAVG00000000329 N 0.789
U2AF1L4 Equus caballus ENSECAG00000017941 N 0.789
U2AF1L4 Loxodonta africana ENSLAFG00000012923 N 0.789
U2AF1L4 Monodelphis domestica ENSMODG00000014003 N 0.789
U2AF1 Gasterosteus aculeatus ENSGACG00000014605 N 0.788
Aqu1.219575 Amphimedon queenslandica Aqu1.219575 N 0.781
PHUM349680 Pediculus humanus PHUM349680 N 0.779
BGIBMGA010333 Bombyx mori BGIBMGA010333 N 0.779
nasonia_NCBI_hmm622923 Nasonia vitripennis nasonia_NCBI_hmm622923 N 0.779
estExt_Genewise1.C_3650003 Capitella teleta estExt_Genewise1.C_3650003 N 0.772
ENSCING00000004086 Ciona intestinalis ENSCING00000004086 N 0.772
U2AF1L4 Gorilla gorilla ENSGGOG00000016828 N 0.772
e_gw1.30.183.1 Daphnia pulex e_gw1.30.183.1 N 0.770
amel4_ncbi_hmm38272 Apis mellifera amel4_ncbi_hmm38272 N 0.770
U2AF1L4 Homo sapiens ENSG00000161265 N 0.763
AGAP002956 Anopheles gambiae AGAP002956 N 0.761
AAEL006713 Aedes aegypti AAEL006713 N 0.761
U2AF1 Takifugu rubripes ENSTRUG00000013815 N 0.761
CpipJ_CPIJ016711 Culex pipiens CpipJ_CPIJ016711 N 0.761
ENSORLG00000008857 Oryzias latipes ENSORLG00000008857 N 0.761
CPIJ016711 Culex quinquefasciatus CPIJ016711 N 0.761
CPIJ003901 Culex quinquefasciatus CPIJ003901 N 0.761
CpipJ_CPIJ003901 Culex pipiens CpipJ_CPIJ003901 N 0.761
GE16227 Drosophila yakuba FBgn0233767 N 0.752
PTSG_08923 Salpingoeca rosetta PTSG_08923 N 0.752
GI15018 Drosophila mojavensis FBgn0137768 N 0.752
GG24659 Drosophila erecta FBgn0116791 N 0.752
GK14823 Drosophila willistoni FBgn0216828 N 0.752
GF24893 Drosophila ananassae FBgn0101885 N 0.752
GA17536-RA Drosophila pseudoobscura FBgn0077547 N 0.752
U2af38 Drosophila melanogaster FBgn0017457 N 0.752
GL25824 Drosophila persimilis FBgn0163408 N 0.752
GH10217 Drosophila grimshawi FBgn0117698 N 0.752
GD22967 Drosophila simulans FBgn0194360 N 0.752
GJ17240 Drosophila virilis FBgn0204416 N 0.752
GM16679 Drosophila sechellia FBgn0171592 N 0.752
e_gw1.35.104.1 Trichoplax adhaerens e_gw1.35.104.1 N 0.746
184981 Helobdella robusta 184981 N 0.746
ENSGGOG00000025487 Gorilla gorilla ENSGGOG00000025487 N 0.732
U2AF1L4 Pan troglodytes ENSPTRG00000010860 N 0.731
Smp_093100 Schistosoma mansoni Smp_093100 N 0.711