Smp_093100 (Schistosoma mansoni)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		Smp_093100 T01137_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Smp_093100 CCCH ZF 13 39
Smp_093100 RRM 75 141
Smp_093100 CCCH ZF 149 175

Links

Other CCCH ZF,RRM family RBPs
Other Schistosoma mansoni RBPs

95 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Sjc_0045900 Schistosoma japonicum Sjc_0045900 N 0.952
PHUM349680 Pediculus humanus PHUM349680 N 0.851
nasonia_NCBI_hmm622923 Nasonia vitripennis nasonia_NCBI_hmm622923 N 0.851
e_gw1.49.82.1 Lottia gigantea e_gw1.49.82.1 N 0.851
BGIBMGA010333 Bombyx mori BGIBMGA010333 N 0.851
amel4_ncbi_hmm38272 Apis mellifera amel4_ncbi_hmm38272 N 0.843
AAI08559 Xenopus laevis AAI08559 N 0.843
e_gw1.30.183.1 Daphnia pulex e_gw1.30.183.1 N 0.843
ENSCING00000004086 Ciona intestinalis ENSCING00000004086 N 0.843
e_gw.8.587.1 Branchiostoma floridae e_gw.8.587.1 N 0.843
e_gw.8.588.1 Branchiostoma floridae e_gw.8.588.1 N 0.843
estExt_Genewise1.C_3650003 Capitella teleta estExt_Genewise1.C_3650003 N 0.843
U2af1 Mus musculus ENSMUSG00000061613 N 0.835
U2AF1 Oryzias latipes ENSORLG00000006182 N 0.835
U2AF1 Cavia porcellus ENSCPOG00000004893 N 0.835
U2AF1 Monodelphis domestica ENSMODG00000021029 N 0.835
U2AF1 Echinops telfairi ENSETEG00000002200 N 0.835
U2AF1 Homo sapiens ENSG00000160201 N 0.835
U2AF1 Loxodonta africana ENSLAFG00000011460 N 0.835
U2AF1 Microcebus murinus ENSMICG00000013835 N 0.835
U2AF1 Macaca mulatta ENSMMUG00000022769 N 0.835
CPIJ003901 Culex quinquefasciatus CPIJ003901 N 0.835
U2AF1 Tetraodon nigroviridis ENSTNIG00000008311 N 0.835
AAEL006713 Aedes aegypti AAEL006713 N 0.835
CpipJ_CPIJ016711 Culex pipiens CpipJ_CPIJ016711 N 0.835
CpipJ_CPIJ003901 Culex pipiens CpipJ_CPIJ003901 N 0.835
U2AF1 Tarsius syrichta ENSTSYG00000006799 N 0.835
AGAP002956 Anopheles gambiae AGAP002956 N 0.835
Q98TR0_CHICK Gallus gallus ENSGALG00000016198 N 0.835
U2AF1 Taeniopygia guttata ENSTGUG00000005826 N 0.835
U2AF1_BOVIN Bos taurus ENSBTAG00000011645 N 0.835
U2AF1 Anolis carolinensis ENSACAG00000017836 N 0.835
CPIJ016711 Culex quinquefasciatus CPIJ016711 N 0.835
U2AF1 Pan troglodytes ENSPTRG00000013952 N 0.835
Aqu1.219575 Amphimedon queenslandica Aqu1.219575 N 0.826
u2af1 Danio rerio ENSDARG00000015325 N 0.826
ENSCSAVG00000000329 Ciona savignyi ENSCSAVG00000000329 N 0.826
ENSGACG00000003454 Gasterosteus aculeatus ENSGACG00000003454 N 0.826
U2AF1 Gasterosteus aculeatus ENSGACG00000014605 N 0.826
GM16679 Drosophila sechellia FBgn0171592 N 0.818
U2AF1 Procavia capensis ENSPCAG00000013413 N 0.818
U2AF1 Takifugu rubripes ENSTRUG00000013815 N 0.818
GD22967 Drosophila simulans FBgn0194360 N 0.818
U2af38 Drosophila melanogaster FBgn0017457 N 0.818
GH10217 Drosophila grimshawi FBgn0117698 N 0.818
GI15018 Drosophila mojavensis FBgn0137768 N 0.818
GG24659 Drosophila erecta FBgn0116791 N 0.818
GF24893 Drosophila ananassae FBgn0101885 N 0.818
GA17536-RA Drosophila pseudoobscura FBgn0077547 N 0.818
LOC100415206 Callithrix jacchus ENSCJAG00000015843 N 0.818
GJ17240 Drosophila virilis FBgn0204416 N 0.818
GE16227 Drosophila yakuba FBgn0233767 N 0.818
GK14823 Drosophila willistoni FBgn0216828 N 0.818
GL25824 Drosophila persimilis FBgn0163408 N 0.818
U2af1 Dipodomys ordii ENSDORG00000000211 N 0.810
Ame_R019749 Ailuropoda melanoleuca Ame_R019749 N 0.810
U2AF1 Myotis lucifugus ENSMLUG00000014756 N 0.810
U2AF1 Meleagris gallopavo ENSMGAG00000014587 N 0.810
LOC100057570 Equus caballus ENSECAG00000015558 N 0.810
U2AF1 Vicugna pacos ENSVPAG00000002856 N 0.810
e_gw1.35.104.1 Trichoplax adhaerens e_gw1.35.104.1 N 0.810
U2AF1 Pteropus vampyrus ENSPVAG00000016992 N 0.810
U2AF1 Canis familiaris ENSCAFG00000010572 N 0.810
U2AF1 Ornithorhynchus anatinus ENSOANG00000006463 N 0.810
XP_001191705.1 Strongylocentrotus purpuratus XP_001191705.1 N 0.810
U2AF1 Spermophilus tridecemlineatus ENSSTOG00000012766 N 0.810
U2AF1 Tupaia belangeri ENSTBEG00000000453 N 0.810
e_gw.121.26.1 Nematostella vectensis e_gw.121.26.1 N 0.802
184981 Helobdella robusta 184981 N 0.802
ENSORLG00000008857 Oryzias latipes ENSORLG00000008857 N 0.802
DGIL_AUG5s4512g5t1 Acyrtosiphon pisum DGIL_AUG5s4512g5t1 N 0.802
ENSTNIG00000013914 Tetraodon nigroviridis ENSTNIG00000013914 N 0.795
Q9YHU4_FUGRU Takifugu rubripes ENSTRUG00000010538 N 0.795
U2af1l4 Mus musculus ENSMUSG00000078765 N 0.795
U2AF1L4 Loxodonta africana ENSLAFG00000012923 N 0.795
U2AF1L4 Sus scrofa ENSSSCG00000002896 N 0.795
U2AF1L4 Equus caballus ENSECAG00000017941 N 0.795
U2AF1L4 Oryctolagus cuniculus ENSOCUG00000013434 N 0.795
U2af1l4 Rattus norvegicus ENSRNOG00000024497 N 0.795
U2AF4_BOVIN Bos taurus ENSBTAG00000023610 N 0.795
U2AF1L4 Monodelphis domestica ENSMODG00000014003 N 0.787
U2AF1L4 Gorilla gorilla ENSGGOG00000016828 N 0.779
U2AF1L4 Homo sapiens ENSG00000161265 N 0.770
U2AF1L4 Pan troglodytes ENSPTRG00000010860 N 0.766
PTSG_08923 Salpingoeca rosetta PTSG_08923 N 0.752
XP_002156010.1 Hydra magnipapillata XP_002156010.1 N 0.752
Aqu1.226671 Amphimedon queenslandica Aqu1.226671 N 0.752
SPPG_02695 Spizellomyces punctatus SPPG_02695 N 0.752
ENSGGOG00000025487 Gorilla gorilla ENSGGOG00000025487 N 0.752
ISCW019664 Ixodes scapularis ISCW019664 N 0.719
XP_002167624.1 Hydra magnipapillata XP_002167624.1 N 0.711
Bm1_56100 Brugia malayi Bm1_56100 N 0.705
LOAG_10291 Loa loa LOAG_10291 N 0.705
WUBG_09132 Wuchereria bancrofti WUBG_09132 N 0.705
estExt_Genewise1Plus.C_31771 Mucor circinelloides estExt_Genewise1Plus.C_31771 N 0.702