IGF2BP3 (Oryzias latipes)
KH,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1)
PF00076 (RRM_1) 		IPR018111
IPR000504 		ENSORLG00000004712 T22252_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
IGF2BP3
M295_0.6 		Homo sapiens Sequence logo not available CAUU PAR-clip
Cook et al.(2011)
357_20371350 		0.827
IGF2BP3
M163_0.6 		Homo sapiens AMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00172 		0.827
IGF2BP1
M296_0.6 		Homo sapiens AAGCACCCGUU SELEX
Cook et al.(2011)
359_12507992 		0.779
IGF2BP1
M293_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
355_20371350 		0.779
IGF2BP2
M294_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
356_20371350 		0.739
IGF2BP2
M032_0.6 		Homo sapiens VMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00033 		0.739
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000005929 RRM 4 69
ENSORLP00000005929 RRM 83 150
ENSORLP00000005929 KH 196 259
ENSORLP00000005929 KH 277 342
ENSORLP00000005929 KH 410 473
ENSORLP00000005929 KH 492 556
ENSORLP00000005931 RRM 4 69

Links

Other KH,RRM family RBPs
Other Oryzias latipes RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
IGF2BP3 Tetraodon nigroviridis ENSTNIG00000017755 I 0.939
IGF2BP3 Takifugu rubripes ENSTRUG00000006094 I 0.936
igf2bp3 Danio rerio ENSDARG00000010266 I 0.882
IGF2BP3 Taeniopygia guttata ENSTGUG00000002773 I 0.865
AAH57700 Xenopus laevis AAH57700 I 0.865
igf2bp3 Xenopus tropicalis ENSXETG00000007396 I 0.865
O57526 Xenopus laevis O57526 I 0.865
IF2B3_CHICK Gallus gallus ENSGALG00000010961 I 0.865
AAB97457 Xenopus laevis AAB97457 I 0.865
AAC18597 Xenopus laevis AAC18597 I 0.865
IGF2BP3 Anolis carolinensis ENSACAG00000013538 I 0.858
AAC18598 Xenopus laevis AAC18598 I 0.855
AAI70224 Xenopus laevis AAI70224 I 0.855
O73932 Xenopus laevis O73932 I 0.855
AAI70479 Xenopus laevis AAI70479 I 0.855
AAI70477 Xenopus laevis AAI70477 I 0.855
AAI70196 Xenopus laevis AAI70196 I 0.855
AAC41285 Xenopus laevis AAC41285 I 0.855
IGF2BP3 Ornithorhynchus anatinus ENSOANG00000014203 I 0.853
IGF2BP3 Tursiops truncatus ENSTTRG00000008921 I 0.832
IGF2BP3 Monodelphis domestica ENSMODG00000001014 I 0.828
XR_022832.1 Pan troglodytes ENSPTRG00000018986 I 0.827
IGF2BP3 Callithrix jacchus ENSCJAG00000001499 I 0.827
Igf2bp3 Dipodomys ordii ENSDORG00000014185 I 0.827
IGF2BP3 Homo sapiens ENSG00000136231 D 0.827
IGF2BP3 Macaca mulatta ENSMMUG00000004839 I 0.827
Igf2bp3 Mus musculus ENSMUSG00000029814 I 0.819
D3ZB84_RAT Rattus norvegicus ENSRNOG00000009052 I 0.819
IGF2BP3 Microcebus murinus ENSMICG00000013683 I 0.808
IGF2BP1 Anolis carolinensis ENSACAG00000006199 I 0.791
igf2bp1 Danio rerio ENSDARG00000061478 I 0.791
IGF2BP1 Gasterosteus aculeatus ENSGACG00000005318 I 0.784
IGF2BP1 Microcebus murinus ENSMICG00000013324 I 0.781
IF2B1_CHICK Gallus gallus ENSGALG00000001293 I 0.781
IGF2BP1 Pan troglodytes ENSPTRG00000009368 I 0.781
IGF2BP1 Bos taurus ENSBTAG00000011736 I 0.779
IGF2BP1 Homo sapiens ENSG00000159217 D 0.779
IGF2BP1 Equus caballus ENSECAG00000009723 I 0.779
ENSPPYG00000008913 Pongo pygmaeus ENSPPYG00000008913 I 0.779
Ame_R004727 Ailuropoda melanoleuca Ame_R004727 I 0.779
LOC100395821 Callithrix jacchus ENSCJAG00000007258 I 0.779
IGF2BP1 Loxodonta africana ENSLAFG00000002048 I 0.779
IGF2BP1 Macaca mulatta ENSMMUG00000011533 I 0.776
Igf2bp1 Rattus norvegicus ENSRNOG00000006122 I 0.776
Igf2bp1 Mus musculus ENSMUSG00000013415 I 0.776
IGF2BP1 Monodelphis domestica ENSMODG00000012268 I 0.776
IGF2BP1 Canis familiaris ENSCAFG00000016907 I 0.774
IGF2BP1 Oryctolagus cuniculus ENSOCUG00000004411 I 0.771
IGF2BP1 Gorilla gorilla ENSGGOG00000008872 I 0.766
igf2bp2a Danio rerio ENSDARG00000003421 I 0.764
IGF2BP1 Tetraodon nigroviridis ENSTNIG00000013986 I 0.761
IGF2BP1 Tursiops truncatus ENSTTRG00000007197 I 0.754
IGF2BP3 Choloepus hoffmanni ENSCHOG00000002341 I 0.751
ENSPPYG00000017730 Pongo pygmaeus ENSPPYG00000017730 I 0.748
LOC424865 Gallus gallus ENSGALG00000006523 I 0.746
IGF2BP1 Cavia porcellus ENSCPOG00000020174 I 0.746
IGF2BP1 Otolemur garnettii ENSOGAG00000001270 I 0.746
XR_025001.1 Pan troglodytes ENSPTRG00000015705 I 0.739
IGF2BP2 Macaca mulatta ENSMMUG00000023416 I 0.739
IGF2BP2 Homo sapiens ENSG00000073792 D 0.739
IGF2BP2 Gasterosteus aculeatus ENSGACG00000005991 I 0.739
Igf2bp2 Mus musculus ENSMUSG00000033581 I 0.736
Igf2bp2 Rattus norvegicus ENSRNOG00000025946 I 0.736
IGF2BP2 Oryctolagus cuniculus ENSOCUG00000005057 I 0.736
IGF2BP2 Oryzias latipes ENSORLG00000016532 I 0.726
IGF2BP2 Takifugu rubripes ENSTRUG00000009908 I 0.713
IGF2BP2 Tetraodon nigroviridis ENSTNIG00000016472 I 0.701