IGF2BP3 (Tetraodon nigroviridis)
KH,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1)
PF00076 (RRM_1) 		IPR018111
IPR000504 		ENSTNIG00000017755 T22275_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
IGF2BP3
M295_0.6 		Homo sapiens Sequence logo not available CAUU PAR-clip
Cook et al.(2011)
357_20371350 		0.804
IGF2BP3
M163_0.6 		Homo sapiens AMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00172 		0.804
IGF2BP1
M296_0.6 		Homo sapiens AAGCACCCGUU SELEX
Cook et al.(2011)
359_12507992 		0.761
IGF2BP1
M293_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
355_20371350 		0.761
IGF2BP2
M294_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
356_20371350 		0.739
IGF2BP2
M032_0.6 		Homo sapiens VMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00033 		0.739
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000020906 RRM 4 68
ENSTNIP00000020906 RRM 82 149
ENSTNIP00000020906 KH 195 258
ENSTNIP00000020906 KH 276 341
ENSTNIP00000020906 KH 408 471
ENSTNIP00000020906 KH 490 554

Links

Other KH,RRM family RBPs
Other Tetraodon nigroviridis RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
IGF2BP3 Takifugu rubripes ENSTRUG00000006094 I 0.980
IGF2BP3 Oryzias latipes ENSORLG00000004712 I 0.939
igf2bp3 Danio rerio ENSDARG00000010266 I 0.862
IGF2BP3 Taeniopygia guttata ENSTGUG00000002773 I 0.840
IF2B3_CHICK Gallus gallus ENSGALG00000010961 I 0.840
AAH57700 Xenopus laevis AAH57700 I 0.835
IGF2BP3 Anolis carolinensis ENSACAG00000013538 I 0.835
O57526 Xenopus laevis O57526 I 0.835
AAB97457 Xenopus laevis AAB97457 I 0.835
AAC18597 Xenopus laevis AAC18597 I 0.835
igf2bp3 Xenopus tropicalis ENSXETG00000007396 I 0.835
IGF2BP3 Ornithorhynchus anatinus ENSOANG00000014203 I 0.828
AAC18598 Xenopus laevis AAC18598 I 0.824
AAI70196 Xenopus laevis AAI70196 I 0.824
AAC41285 Xenopus laevis AAC41285 I 0.824
O73932 Xenopus laevis O73932 I 0.824
AAI70224 Xenopus laevis AAI70224 I 0.824
AAI70477 Xenopus laevis AAI70477 I 0.824
AAI70479 Xenopus laevis AAI70479 I 0.824
IGF2BP3 Tursiops truncatus ENSTTRG00000008921 I 0.807
IGF2BP3 Monodelphis domestica ENSMODG00000001014 I 0.805
IGF2BP3 Macaca mulatta ENSMMUG00000004839 I 0.804
XR_022832.1 Pan troglodytes ENSPTRG00000018986 I 0.804
IGF2BP3 Homo sapiens ENSG00000136231 D 0.804
Igf2bp3 Dipodomys ordii ENSDORG00000014185 I 0.804
IGF2BP3 Callithrix jacchus ENSCJAG00000001499 I 0.804
D3ZB84_RAT Rattus norvegicus ENSRNOG00000009052 I 0.796
Igf2bp3 Mus musculus ENSMUSG00000029814 I 0.796
IGF2BP3 Microcebus murinus ENSMICG00000013683 I 0.790
IGF2BP1 Anolis carolinensis ENSACAG00000006199 I 0.779
igf2bp1 Danio rerio ENSDARG00000061478 I 0.776
IF2B1_CHICK Gallus gallus ENSGALG00000001293 I 0.768
IGF2BP1 Gasterosteus aculeatus ENSGACG00000005318 I 0.764
IGF2BP1 Pan troglodytes ENSPTRG00000009368 I 0.763
IGF2BP1 Microcebus murinus ENSMICG00000013324 I 0.763
LOC100395821 Callithrix jacchus ENSCJAG00000007258 I 0.761
IGF2BP1 Bos taurus ENSBTAG00000011736 I 0.761
IGF2BP1 Homo sapiens ENSG00000159217 D 0.761
IGF2BP1 Loxodonta africana ENSLAFG00000002048 I 0.761
Ame_R004727 Ailuropoda melanoleuca Ame_R004727 I 0.761
ENSPPYG00000008913 Pongo pygmaeus ENSPPYG00000008913 I 0.761
IGF2BP1 Equus caballus ENSECAG00000009723 I 0.761
Igf2bp1 Rattus norvegicus ENSRNOG00000006122 I 0.758
Igf2bp1 Mus musculus ENSMUSG00000013415 I 0.758
IGF2BP1 Macaca mulatta ENSMMUG00000011533 I 0.758
IGF2BP1 Monodelphis domestica ENSMODG00000012268 I 0.758
IGF2BP1 Canis familiaris ENSCAFG00000016907 I 0.756
IGF2BP1 Oryctolagus cuniculus ENSOCUG00000004411 I 0.753
igf2bp2a Danio rerio ENSDARG00000003421 I 0.749
IGF2BP1 Gorilla gorilla ENSGGOG00000008872 I 0.748
IGF2BP1 Tetraodon nigroviridis ENSTNIG00000013986 I 0.746
LOC424865 Gallus gallus ENSGALG00000006523 I 0.744
XR_025001.1 Pan troglodytes ENSPTRG00000015705 I 0.739
IGF2BP2 Macaca mulatta ENSMMUG00000023416 I 0.739
IGF2BP2 Homo sapiens ENSG00000073792 D 0.739
Igf2bp2 Rattus norvegicus ENSRNOG00000025946 I 0.736
IGF2BP1 Tursiops truncatus ENSTTRG00000007197 I 0.736
Igf2bp2 Mus musculus ENSMUSG00000033581 I 0.736
IGF2BP2 Oryctolagus cuniculus ENSOCUG00000005057 I 0.736
IGF2BP2 Gasterosteus aculeatus ENSGACG00000005991 I 0.736
IGF2BP1 Cavia porcellus ENSCPOG00000020174 I 0.730
ENSPPYG00000017730 Pongo pygmaeus ENSPPYG00000017730 I 0.730
IGF2BP3 Choloepus hoffmanni ENSCHOG00000002341 I 0.725
IGF2BP1 Otolemur garnettii ENSOGAG00000001270 I 0.725
IGF2BP2 Oryzias latipes ENSORLG00000016532 I 0.721
IGF2BP2 Takifugu rubripes ENSTRUG00000009908 I 0.713
IGF2BP2 Tetraodon nigroviridis ENSTNIG00000016472 I 0.704