SPPG_04286 (Spizellomyces punctatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SPPG_04286 T30841_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SPPG_04286T0 RRM 21 88

Links

Other RRM family RBPs
Other Spizellomyces punctatus RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GP3.080340 Batrachochytrium dendrobatidis GP3.080340 N 0.824
estExt_fgeneshPB_pg.C_50297 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_50297 N 0.794
RO3G_04631 Rhizopus oryzae RO3G_04631 N 0.779
fgeneshMC_pg.3_#_621 Mucor circinelloides fgeneshMC_pg.3_#_621 N 0.779
Cucsa.086930 Cucumis sativus Cucsa.086930 N 0.765
fgeneshTA2_pm.C_scaffold_21000029 Trichoplax adhaerens fgeneshTA2_pm.C_scaffold_21000029 N 0.765
TA13725 Theileria annulata TA13725 N 0.754
Medtr5g096400 Medicago truncatula Medtr5g096400 N 0.750
PITG_10282 Phytophthora infestans PITG_10282 N 0.750
s_454910 Phytophthora sojae s_454910 N 0.750
chr2.CM0308.280.nc Lotus japonicus chr2.CM0308.280.nc N 0.750
Glyma02g44710.1 Glycine max Glyma02g44710.1 N 0.750
estExt_fgenesh1_pg.C_130126 Phytophthora capsici estExt_fgenesh1_pg.C_130126 N 0.750
e_gw1.13.49.1 Emiliania huxleyi e_gw1.13.49.1 N 0.750
estExt_fgenesh1_pg.C_1580052 Nematostella vectensis estExt_fgenesh1_pg.C_1580052 N 0.739
ENSCSAVG00000008970 Ciona savignyi ENSCSAVG00000008970 N 0.739
ENSCING00000012689 Ciona intestinalis ENSCING00000012689 N 0.739
PHATR_8132 Phaeodactylum tricornutum Phatr8132 N 0.739
mgf016428m Mimulus guttatus mgf016428m N 0.735
fgenesh1_pm.C_scaffold_108000003 Phytophthora ramorum fgenesh1_pm.C_scaffold_108000003 N 0.735
PCHAS_144180 Plasmodium chabaudi PCHAS_144180 N 0.735
XM_002873508.1 Arabidopsis lyrata scaffold_601250.1 N 0.735
AT5G12190 Arabidopsis thaliana AT5G12190-TAIR-G N 0.735
nasonia_NCBI_hmm146063 Nasonia vitripennis nasonia_NCBI_hmm146063 N 0.725
GSVIVG00037329001 Vitis vinifera GSVIVG00037329001 N 0.725
nasonia_NCBI_hmm648054 Nasonia vitripennis nasonia_NCBI_hmm648054 N 0.725
Glyma14g04020.1 Glycine max Glyma14g04020.1 N 0.725
DGIL_AUG5s10565g5t1 Acyrtosiphon pisum DGIL_AUG5s10565g5t1 N 0.725
PK21780.1 Cannabis sativa PK21780.1 N 0.725
amel4_ncbi_hmm5835 Apis mellifera amel4_ncbi_hmm5835 N 0.725
amel4_ncbi_hmm5835 Tribolium castaneum amel4_ncbi_hmm5835 N 0.725
estExt_GenewiseH_1.C_6800062 Branchiostoma floridae estExt_GenewiseH_1.C_6800062 N 0.725
estExt_Genewise1.C_630098 Physcomitrella patens estExt_Genewise1.C_630098 N 0.725
ppa013407m Prunus persica ppa013407m N 0.725
cassava30358.valid.m1 Manihot esculenta cassava30358.valid.m1 N 0.725
ppa013405m Prunus persica ppa013405m N 0.725
e_gw1.17.197.1 Volvox carteri e_gw1.17.197.1 N 0.725
MDP0000185506 Malus x domestica MDP0000185506 N 0.725
PHUM617060 Pediculus humanus PHUM617060 N 0.725
B9GG60_POPTR Populus trichocarpa POPTR_0001s28000 N 0.725
TP02_0539 Theileria parva TP02_0539 N 0.725
29868.m000351 Ricinus communis 29868.m000351 N 0.725
estExt_fgenesh1_kg.C_20004 Daphnia pulex estExt_fgenesh1_kg.C_20004 N 0.721
XM_002883819.1 Arabidopsis lyrata scaffold_303681.1 N 0.721
EDO06533.1 Babesia bovis EDO06533.1 N 0.710
B9HNI9_POPTR Populus trichocarpa POPTR_0009s07180 N 0.710
ENSTRUG00000006551 Takifugu rubripes ENSTRUG00000006551 N 0.710
ENSTNIG00000009719 Tetraodon nigroviridis ENSTNIG00000009719 N 0.710
68671 Helobdella robusta 68671 N 0.710
estExt_fgenesh1_pg.C_2760028 Capitella teleta estExt_fgenesh1_pg.C_2760028 N 0.710
SPRG_00106 Saprolegnia parasitica SPRG_00106 N 0.710
CAOG_04015 Capsaspora owczarzaki CAOG_04015 N 0.706
160.m00066 Tetrahymena thermophila 160.m00066 N 0.706
PBANKA_143980 Plasmodium berghei PBANKA_143980 N 0.706
AMAG_00826 Allomyces macrogynus AMAG_00826 N 0.706
AMAG_02330 Allomyces macrogynus AMAG_02330 N 0.706