CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
AGAP006656
(
Anopheles gambiae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AGAP006656
T32519_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP006656-PA
RRM
1
57
SLRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKID
AGAP006656-PA
RRM
77
146
IFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVE
AGAP006656-PB
RRM
1
57
SLRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKID
AGAP006656-PB
RRM
77
146
IFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVE
Links
Other
RRM
family RBPs
Other
Anopheles gambiae
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm598804
Nasonia vitripennis
nasonia_NCBI_hmm598804
N
0.902
MSI2
Pteropus vampyrus
ENSPVAG00000017053
I
0.827
GD12423
Drosophila simulans
FBgn0184155
I
0.821
GM24349
Drosophila sechellia
FBgn0179213
I
0.821
GI12835
Drosophila mojavensis
FBgn0135592
I
0.821
GH15068
Drosophila grimshawi
FBgn0122543
I
0.821
GG15829
Drosophila erecta
FBgn0108068
I
0.821
GE22169
Drosophila yakuba
FBgn0239397
I
0.821
Rbp6
Drosophila melanogaster
FBgn0260943
I
0.821
GK18043
Drosophila willistoni
FBgn0220042
I
0.821
GF24401
Drosophila ananassae
FBgn0101395
I
0.821
LOC100390978
Callithrix jacchus
ENSCJAG00000013998
I
0.789
gw1.72.166.1
Daphnia pulex
gw1.72.166.1
I
0.779
amel4_ncbi_hmm21060
Apis mellifera
amel4_ncbi_hmm21060
N
0.764
MSI1
Felis catus
ENSFCAG00000011007
I
0.756
MSI2
Pan troglodytes
ENSPTRG00000009437
I
0.750
Ame_R019333
Ailuropoda melanoleuca
Ame_R019333
I
0.750
Msi1
Rattus norvegicus
ENSRNOG00000001156
I
0.750
MSI2
Oryctolagus cuniculus
ENSOCUG00000010440
I
0.750
MSI1
Oryctolagus cuniculus
ENSOCUG00000027716
I
0.750
MSI2
Gorilla gorilla
ENSGGOG00000013182
I
0.750
MSI2
Homo sapiens
ENSG00000153944
I
0.750
msi2b
Danio rerio
ENSDARG00000032614
I
0.750
MSI1
Macaca mulatta
ENSMMUG00000031527
I
0.750
MSI2
Microcebus murinus
ENSMICG00000013598
I
0.750
Msi2
Mus musculus
ENSMUSG00000069769
I
0.750
MSI2
Macaca mulatta
ENSMMUG00000002069
I
0.748
MSI1
Echinops telfairi
ENSETEG00000004756
I
0.748
AAA50004
Xenopus laevis
AAA50004
I
0.743
AAI69841
Xenopus laevis
AAI69841
I
0.743
MSI1
Pteropus vampyrus
ENSPVAG00000002225
I
0.740
msi2a
Danio rerio
ENSDARG00000033901
I
0.736
msi1
Danio rerio
ENSDARG00000010710
I
0.729
estExt_Genewise1Plus.C_620039
Capitella teleta
estExt_Genewise1Plus.C_620039
I
0.729
LOC100053469
Equus caballus
ENSECAG00000017526
I
0.727
MSI1
Pan troglodytes
ENSPTRG00000005531
I
0.724
LOC100070744
Equus caballus
ENSECAG00000011435
I
0.724
MSI2
Canis familiaris
ENSCAFG00000017418
I
0.721
Msi1
Mus musculus
ENSMUSG00000054256
I
0.716