MSI2 (Pteropus vampyrus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPVAG00000017053 T40987_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MSI1
M167_0.6 		Homo sapiens UAGKWRG RNAcompete
Ray et al.(2013)
RNCMPT00176 		0.771
MSI1
M040_0.6 		Homo sapiens UAGUWRG RNAcompete
Ray et al.(2013)
RNCMPT00041 		0.771
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000016085 RRM 1 57
ENSPVAP00000016085 RRM 77 146

Links

Other RRM family RBPs
Other Pteropus vampyrus RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC100390978 Callithrix jacchus ENSCJAG00000013998 I 0.955
Msi2 Mus musculus ENSMUSG00000069769 I 0.907
MSI2 Microcebus murinus ENSMICG00000013598 I 0.907
MSI2 Gorilla gorilla ENSGGOG00000013182 I 0.907
MSI2 Oryctolagus cuniculus ENSOCUG00000010440 I 0.907
MSI2 Homo sapiens ENSG00000153944 I 0.907
MSI2 Pan troglodytes ENSPTRG00000009437 I 0.907
MSI2 Macaca mulatta ENSMMUG00000002069 I 0.901
msi2b Danio rerio ENSDARG00000032614 I 0.893
LOC100070744 Equus caballus ENSECAG00000011435 I 0.882
AAA50004 Xenopus laevis AAA50004 I 0.879
AAI69841 Xenopus laevis AAI69841 I 0.879
MSI2 Canis familiaris ENSCAFG00000017418 I 0.871
msi2a Danio rerio ENSDARG00000033901 I 0.857
MSI1 Oryctolagus cuniculus ENSOCUG00000027716 I 0.852
MSI1 Felis catus ENSFCAG00000011007 I 0.850
Ame_R019333 Ailuropoda melanoleuca Ame_R019333 I 0.844
MSI1 Macaca mulatta ENSMMUG00000031527 I 0.844
MSI1 Echinops telfairi ENSETEG00000004756 I 0.843
Msi1 Rattus norvegicus ENSRNOG00000001156 I 0.836
MSI1 Pteropus vampyrus ENSPVAG00000002225 I 0.835
AGAP006656 Anopheles gambiae AGAP006656 N 0.827
msi1 Danio rerio ENSDARG00000010710 I 0.820
MSI1 Pan troglodytes ENSPTRG00000005531 I 0.819
LOC100053469 Equus caballus ENSECAG00000017526 I 0.812
MSI2 Cavia porcellus ENSCPOG00000008752 N 0.803
Msi1 Mus musculus ENSMUSG00000054256 I 0.799
MSI2 Tarsius syrichta ENSTSYG00000011839 N 0.787
MSI1 Gorilla gorilla ENSGGOG00000010328 I 0.787
MSI1 Taeniopygia guttata ENSTGUG00000009534 I 0.779
ENSPPYG00000005027 Pongo pygmaeus ENSPPYG00000005027 I 0.777
nasonia_NCBI_hmm598804 Nasonia vitripennis nasonia_NCBI_hmm598804 N 0.774
MSI1 Homo sapiens ENSG00000135097 D 0.771
MSI1 Cavia porcellus ENSCPOG00000012361 I 0.771
MSI1 Gasterosteus aculeatus ENSGACG00000012679 I 0.771
MSI1 Anolis carolinensis ENSACAG00000002762 I 0.771
MSI1 Takifugu rubripes ENSTRUG00000016249 I 0.771
MSI1 Callithrix jacchus ENSCJAG00000008578 I 0.771
MSI1 Tetraodon nigroviridis ENSTNIG00000011469 I 0.771
MSI1 Tursiops truncatus ENSTTRG00000005663 I 0.771
msi1 Xenopus tropicalis ENSXETG00000012216 I 0.764
estExt_Genewise1Plus.C_620039 Capitella teleta estExt_Genewise1Plus.C_620039 I 0.764
AAA49920 Xenopus laevis AAA49920 I 0.764
AAH82667 Xenopus laevis AAH82667 I 0.764
CBU92439 Xenopus laevis CBU92439 I 0.764
CBF67566 Xenopus laevis CBF67566 I 0.764
MSI2 Vicugna pacos ENSVPAG00000006837 N 0.764
MSI1 Takifugu rubripes ENSTRUG00000015636 I 0.757
AAA49919 Xenopus laevis AAA49919 I 0.757
AAH84959 Xenopus laevis AAH84959 I 0.757
MSI1 Canis familiaris ENSCAFG00000010283 I 0.754
MSI1 Dasypus novemcinctus ENSDNOG00000005713 I 0.750
MSI2 Bos taurus ENSBTAG00000004406 N 0.736
gw1.72.166.1 Daphnia pulex gw1.72.166.1 I 0.729
GF24401 Drosophila ananassae FBgn0101395 I 0.721
GG15829 Drosophila erecta FBgn0108068 I 0.721
GE22169 Drosophila yakuba FBgn0239397 I 0.721
GD12423 Drosophila simulans FBgn0184155 I 0.721
GK18043 Drosophila willistoni FBgn0220042 I 0.721
GH15068 Drosophila grimshawi FBgn0122543 I 0.721
GM24349 Drosophila sechellia FBgn0179213 I 0.721
GI12835 Drosophila mojavensis FBgn0135592 I 0.721
Rbp6 Drosophila melanogaster FBgn0260943 I 0.721
ENSMGAG00000008742 Meleagris gallopavo ENSMGAG00000008742 I 0.709