GI12835 (Drosophila mojavensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0135592 T43578_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MSI1
M167_0.6 		Homo sapiens UAGKWRG RNAcompete
Ray et al.(2013)
RNCMPT00176 		0.750
MSI1
M040_0.6 		Homo sapiens UAGUWRG RNAcompete
Ray et al.(2013)
RNCMPT00041 		0.750
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0162052 RRM 45 114
FBpp0162052 RRM 134 203

Links

Other RRM family RBPs
Other Drosophila mojavensis RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GH15068 Drosophila grimshawi FBgn0122543 I 1.000
GM24349 Drosophila sechellia FBgn0179213 I 1.000
GF24401 Drosophila ananassae FBgn0101395 I 1.000
Rbp6 Drosophila melanogaster FBgn0260943 I 1.000
GE22169 Drosophila yakuba FBgn0239397 I 1.000
GD12423 Drosophila simulans FBgn0184155 I 1.000
GK18043 Drosophila willistoni FBgn0220042 I 1.000
GG15829 Drosophila erecta FBgn0108068 I 1.000
nasonia_NCBI_hmm598804 Nasonia vitripennis nasonia_NCBI_hmm598804 N 0.843
AGAP006656 Anopheles gambiae AGAP006656 N 0.821
gw1.72.166.1 Daphnia pulex gw1.72.166.1 I 0.821
MSI2 Pan troglodytes ENSPTRG00000009437 I 0.807
estExt_Genewise1Plus.C_620039 Capitella teleta estExt_Genewise1Plus.C_620039 I 0.807
MSI2 Homo sapiens ENSG00000153944 I 0.807
MSI2 Microcebus murinus ENSMICG00000013598 I 0.807
MSI2 Gorilla gorilla ENSGGOG00000013182 I 0.807
Msi2 Mus musculus ENSMUSG00000069769 I 0.807
MSI2 Oryctolagus cuniculus ENSOCUG00000010440 I 0.807
AAI69841 Xenopus laevis AAI69841 I 0.800
msi2b Danio rerio ENSDARG00000032614 I 0.800
AAA50004 Xenopus laevis AAA50004 I 0.800
MSI2 Canis familiaris ENSCAFG00000017418 I 0.786
msi2a Danio rerio ENSDARG00000033901 I 0.786
MSI1 Homo sapiens ENSG00000135097 D 0.750
MSI1 Cavia porcellus ENSCPOG00000012361 I 0.750
Msi1 Mus musculus ENSMUSG00000054256 I 0.750
MSI1 Callithrix jacchus ENSCJAG00000008578 I 0.750
MSI1 Anolis carolinensis ENSACAG00000002762 I 0.750
MSI1 Takifugu rubripes ENSTRUG00000016249 I 0.743
MSI1 Gasterosteus aculeatus ENSGACG00000012679 I 0.743
MSI1 Tursiops truncatus ENSTTRG00000005663 I 0.743
MSI1 Tetraodon nigroviridis ENSTNIG00000011469 I 0.743
MSI1 Taeniopygia guttata ENSTGUG00000009534 I 0.743
msi1 Xenopus tropicalis ENSXETG00000012216 I 0.736
LOC100390978 Callithrix jacchus ENSCJAG00000013998 I 0.736
AAH82667 Xenopus laevis AAH82667 I 0.736
AAA49920 Xenopus laevis AAA49920 I 0.736
msi-1 Caenorhabditis elegans R10E9.1 I 0.736
CBF67566 Xenopus laevis CBF67566 I 0.736
CBU92439 Xenopus laevis CBU92439 I 0.736
MSI1 Canis familiaris ENSCAFG00000010283 I 0.732
ENSPPYG00000005027 Pongo pygmaeus ENSPPYG00000005027 I 0.729
AAA49919 Xenopus laevis AAA49919 I 0.729
CBN10423 Caenorhabditis brenneri CBN10423 I 0.729
AAH84959 Xenopus laevis AAH84959 I 0.729
MSI1 Dasypus novemcinctus ENSDNOG00000005713 I 0.729
MSI1 Takifugu rubripes ENSTRUG00000015636 I 0.721
MSI2 Pteropus vampyrus ENSPVAG00000017053 I 0.721
CBG03639 Caenorhabditis briggsae CBG03639 I 0.721