MSI1 (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000005531 T40666_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MSI1
M167_0.6 		Homo sapiens UAGKWRG RNAcompete
Ray et al.(2013)
RNCMPT00176 		0.850
MSI1
M040_0.6 		Homo sapiens UAGUWRG RNAcompete
Ray et al.(2013)
RNCMPT00041 		0.850
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000009387 RRM 1 49
ENSPTRP00000009387 RRM 69 138

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

52 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MSI1 Gorilla gorilla ENSGGOG00000010328 I 0.950
MSI1 Felis catus ENSFCAG00000011007 I 0.937
Ame_R019333 Ailuropoda melanoleuca Ame_R019333 I 0.930
MSI1 Macaca mulatta ENSMMUG00000031527 I 0.930
MSI1 Echinops telfairi ENSETEG00000004756 I 0.929
MSI1 Oryctolagus cuniculus ENSOCUG00000027716 I 0.922
Msi1 Rattus norvegicus ENSRNOG00000001156 I 0.922
MSI1 Pteropus vampyrus ENSPVAG00000002225 I 0.921
LOC100053469 Equus caballus ENSECAG00000017526 I 0.898
Msi1 Mus musculus ENSMUSG00000054256 I 0.881
msi1 Danio rerio ENSDARG00000010710 I 0.866
ENSPPYG00000005027 Pongo pygmaeus ENSPPYG00000005027 I 0.856
MSI1 Homo sapiens ENSG00000135097 D 0.850
MSI1 Taeniopygia guttata ENSTGUG00000009534 I 0.850
MSI1 Callithrix jacchus ENSCJAG00000008578 I 0.850
MSI1 Cavia porcellus ENSCPOG00000012361 I 0.850
MSI1 Tursiops truncatus ENSTTRG00000005663 I 0.850
ENSMGAG00000008742 Meleagris gallopavo ENSMGAG00000008742 I 0.849
MSI1 Anolis carolinensis ENSACAG00000002762 I 0.843
LOC100070744 Equus caballus ENSECAG00000011435 I 0.832
MSI1 Canis familiaris ENSCAFG00000010283 I 0.831
AAA49920 Xenopus laevis AAA49920 I 0.829
MSI1 Dasypus novemcinctus ENSDNOG00000005713 I 0.829
msi1 Xenopus tropicalis ENSXETG00000012216 I 0.829
AAH82667 Xenopus laevis AAH82667 I 0.829
CBF67566 Xenopus laevis CBF67566 I 0.829
CBU92439 Xenopus laevis CBU92439 I 0.829
AAH84959 Xenopus laevis AAH84959 I 0.821
AAA49919 Xenopus laevis AAA49919 I 0.821
MSI2 Pteropus vampyrus ENSPVAG00000017053 I 0.819
MSI1 Tetraodon nigroviridis ENSTNIG00000011469 I 0.786
MSI1 Takifugu rubripes ENSTRUG00000016249 I 0.786
MSI1 Gasterosteus aculeatus ENSGACG00000012679 I 0.786
LOC100390978 Callithrix jacchus ENSCJAG00000013998 I 0.782
MSI1 Takifugu rubripes ENSTRUG00000015636 I 0.771
MSI2 Cavia porcellus ENSCPOG00000008752 N 0.765
msi2b Danio rerio ENSDARG00000032614 I 0.750
MSI2 Tarsius syrichta ENSTSYG00000011839 N 0.748
MSI2 Microcebus murinus ENSMICG00000013598 I 0.743
Msi2 Mus musculus ENSMUSG00000069769 I 0.743
AAI69841 Xenopus laevis AAI69841 I 0.743
MSI2 Homo sapiens ENSG00000153944 I 0.743
MSI2 Oryctolagus cuniculus ENSOCUG00000010440 I 0.743
AAA50004 Xenopus laevis AAA50004 I 0.743
MSI2 Gorilla gorilla ENSGGOG00000013182 I 0.743
MSI2 Pan troglodytes ENSPTRG00000009437 I 0.743
msi2a Danio rerio ENSDARG00000033901 I 0.736
MSI1 Loxodonta africana ENSLAFG00000009412 I 0.734
MSI2 Macaca mulatta ENSMMUG00000002069 I 0.733
MSI1 Ochotona princeps ENSOPRG00000016879 I 0.732
MSI2 Canis familiaris ENSCAFG00000017418 I 0.729
AGAP006656 Anopheles gambiae AGAP006656 N 0.724