HNRNPA3 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000015889 T35134_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.705
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.705
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000023363 RRM 1 58
ENSCAFP00000023363 RRM 75 147

Links

Other RRM family RBPs
Other Canis familiaris RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPPYG00000013564 Pongo pygmaeus ENSPPYG00000013564 N 0.765
ENSPPYG00000001326 Pongo pygmaeus ENSPPYG00000001326 I 0.755
ENSRNOG00000030250 Rattus norvegicus ENSRNOG00000030250 I 0.745
LOC781499 Bos taurus ENSBTAG00000021580 I 0.737
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.737
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.737
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.737
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.737
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.737
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.737
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.737
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.737
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.737
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.737
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.737
HNRNPA3 Homo sapiens ENSG00000170144 I 0.737
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.737
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.737
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.737
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.737
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.737
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.737
D4A8U2_RAT Rattus norvegicus ENSRNOG00000007252 I 0.736
ENSMODG00000024570 Monodelphis domestica ENSMODG00000024570 I 0.736
ENSEEUG00000000925 Erinaceus europaeus ENSEEUG00000000925 I 0.733
LOC100066794 Equus caballus ENSECAG00000023237 I 0.730
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.730
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.730
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.730
ENSRNOG00000033211 Rattus norvegicus ENSRNOG00000033211 I 0.729
ENSRNOG00000042377 Rattus norvegicus ENSRNOG00000042377 I 0.728
ENSRNOG00000043173 Rattus norvegicus ENSRNOG00000043173 I 0.724
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.724
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.724
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.724
Gm8991 Mus musculus ENSMUSG00000059179 I 0.724
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.724
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.724
D3ZK54_RAT Rattus norvegicus ENSRNOG00000025482 I 0.722
D3ZB90_RAT Rattus norvegicus ENSRNOG00000038392 N 0.722
ENSOCUG00000006431 Oryctolagus cuniculus ENSOCUG00000006431 I 0.721
D3ZB98_RAT Rattus norvegicus ENSRNOG00000029641 I 0.712
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.711
Ame_R015370 Ailuropoda melanoleuca Ame_R015370 I 0.710
ENSRNOG00000024652 Rattus norvegicus ENSRNOG00000024652 I 0.708
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.704
ENSCAFG00000023240 Canis familiaris ENSCAFG00000023240 I 0.701