ENSOCUG00000006431 (Oryctolagus cuniculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOCUG00000006431 T39644_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.762
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.762
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.762
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.748
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000016991 RRM 36 104
ENSOCUP00000016991 RRM 126 198

Links

Other RRM family RBPs
Other Oryctolagus cuniculus RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPPYG00000001326 Pongo pygmaeus ENSPPYG00000001326 I 0.804
D4A8U2_RAT Rattus norvegicus ENSRNOG00000007252 I 0.790
ENSRNOG00000042377 Rattus norvegicus ENSRNOG00000042377 I 0.788
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.775
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.775
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.773
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.773
LOC100066794 Equus caballus ENSECAG00000023237 I 0.773
ENSRNOG00000033211 Rattus norvegicus ENSRNOG00000033211 I 0.769
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.768
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.768
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.768
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.768
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.768
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.768
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.768
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.768
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.768
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.768
HNRNPA3 Homo sapiens ENSG00000170144 I 0.768
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.768
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.768
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.768
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.768
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.768
LOC781499 Bos taurus ENSBTAG00000021580 I 0.768
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.768
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.767
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.767
Gm8991 Mus musculus ENSMUSG00000059179 I 0.767
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.767
D3ZB98_RAT Rattus norvegicus ENSRNOG00000029641 I 0.766
ENSRNOG00000030250 Rattus norvegicus ENSRNOG00000030250 I 0.766
D3ZK54_RAT Rattus norvegicus ENSRNOG00000025482 I 0.762
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.760
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.760
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.760
ENSEEUG00000000925 Erinaceus europaeus ENSEEUG00000000925 I 0.759
ENSMODG00000024570 Monodelphis domestica ENSMODG00000024570 I 0.755
ENSRNOG00000024652 Rattus norvegicus ENSRNOG00000024652 I 0.755
ENSCAFG00000023240 Canis familiaris ENSCAFG00000023240 I 0.755
D3ZB90_RAT Rattus norvegicus ENSRNOG00000038392 N 0.752
ENSRNOG00000043173 Rattus norvegicus ENSRNOG00000043173 I 0.750
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.747
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.747
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.742
ENSTTRG00000015563 Tursiops truncatus ENSTTRG00000015563 I 0.742
D4ACP9_RAT Rattus norvegicus ENSRNOG00000021929 I 0.741
P51968 Xenopus laevis P51968 I 0.740
AAA49949 Xenopus laevis AAA49949 I 0.740
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.735
AAA49950 Xenopus laevis AAA49950 I 0.730
CBF67578 Xenopus laevis CBF67578 I 0.730
AAI69881 Xenopus laevis AAI69881 I 0.730
P51992 Xenopus laevis P51992 I 0.730
CBU92451 Xenopus laevis CBU92451 I 0.730
D3ZX95_RAT Rattus norvegicus ENSRNOG00000027006 I 0.725
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.724
HNRNPA3 Canis familiaris ENSCAFG00000015889 I 0.721
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.718
ENSDORG00000011155 Dipodomys ordii ENSDORG00000011155 I 0.718
HNRNPA3 Loxodonta africana ENSLAFG00000027712 I 0.718
HNRNPA3 Microcebus murinus ENSMICG00000005513 I 0.717
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.715
Ame_R015370 Ailuropoda melanoleuca Ame_R015370 I 0.710
ENSSSCG00000015989 Sus scrofa ENSSSCG00000015989 I 0.709
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.707
ENSRNOG00000030901 Rattus norvegicus ENSRNOG00000030901 I 0.707
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.707
ENSRNOG00000022655 Rattus norvegicus ENSRNOG00000022655 N 0.706
D4A6Z0_RAT Rattus norvegicus ENSRNOG00000042924 N 0.706
ENSCJAG00000006928 Callithrix jacchus ENSCJAG00000006928 I 0.700