ENSRNOG00000024652 (Rattus norvegicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSRNOG00000024652 T41171_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.720
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.720
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.720
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.706
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000049281 RRM 34 103
ENSRNOP00000049281 RRM 125 191

Links

Other RRM family RBPs
Other Rattus norvegicus RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPPYG00000001326 Pongo pygmaeus ENSPPYG00000001326 I 0.807
D4A8U2_RAT Rattus norvegicus ENSRNOG00000007252 I 0.786
ENSMODG00000024570 Monodelphis domestica ENSMODG00000024570 I 0.779
ENSRNOG00000033211 Rattus norvegicus ENSRNOG00000033211 I 0.771
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.769
D3ZK54_RAT Rattus norvegicus ENSRNOG00000025482 I 0.764
D3ZB90_RAT Rattus norvegicus ENSRNOG00000038392 N 0.761
ENSRNOG00000030250 Rattus norvegicus ENSRNOG00000030250 I 0.761
ENSRNOG00000043173 Rattus norvegicus ENSRNOG00000043173 I 0.759
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.758
ENSCAFG00000023240 Canis familiaris ENSCAFG00000023240 I 0.757
LOC100066794 Equus caballus ENSECAG00000023237 I 0.757
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.757
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.757
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.757
ENSRNOG00000042377 Rattus norvegicus ENSRNOG00000042377 I 0.755
ENSOCUG00000006431 Oryctolagus cuniculus ENSOCUG00000006431 I 0.755
D3ZB98_RAT Rattus norvegicus ENSRNOG00000029641 I 0.754
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.752
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.752
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.752
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.752
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.752
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.752
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.752
HNRNPA3 Homo sapiens ENSG00000170144 I 0.752
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.752
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.752
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.752
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.752
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.752
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.752
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.752
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.752
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.752
LOC781499 Bos taurus ENSBTAG00000021580 I 0.752
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.750
Gm8991 Mus musculus ENSMUSG00000059179 I 0.750
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.750
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.750
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.750
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.745
D4ACP9_RAT Rattus norvegicus ENSRNOG00000021929 I 0.745
ENSTTRG00000015563 Tursiops truncatus ENSTTRG00000015563 I 0.741
ENSEEUG00000000925 Erinaceus europaeus ENSEEUG00000000925 I 0.739
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.736
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.725
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.723
ENSRNOG00000030901 Rattus norvegicus ENSRNOG00000030901 I 0.723
D4A6Z0_RAT Rattus norvegicus ENSRNOG00000042924 N 0.721
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.720
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.718
AAA49949 Xenopus laevis AAA49949 I 0.716
P51968 Xenopus laevis P51968 I 0.716
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.709
HNRNPA3 Canis familiaris ENSCAFG00000015889 I 0.708
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.707
D3ZX95_RAT Rattus norvegicus ENSRNOG00000027006 I 0.707
AAA49950 Xenopus laevis AAA49950 I 0.707
CBF67578 Xenopus laevis CBF67578 I 0.707
AAI69881 Xenopus laevis AAI69881 I 0.707
CBU92451 Xenopus laevis CBU92451 I 0.707
P51992 Xenopus laevis P51992 I 0.707
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.703
ENSDORG00000011155 Dipodomys ordii ENSDORG00000011155 I 0.701
HNRNPA3 Loxodonta africana ENSLAFG00000027712 I 0.701
HNRNPA3 Microcebus murinus ENSMICG00000005513 I 0.700