ENSRNOG00000033211 (Rattus norvegicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSRNOG00000033211 T41223_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.764
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.764
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.764
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.743
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.714
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000039690 RRM 26 94
ENSRNOP00000039690 RRM 115 184

Links

Other RRM family RBPs
Other Rattus norvegicus RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSRNOG00000042377 Rattus norvegicus ENSRNOG00000042377 I 0.810
ENSPPYG00000001326 Pongo pygmaeus ENSPPYG00000001326 I 0.807
ENSRNOG00000043173 Rattus norvegicus ENSRNOG00000043173 I 0.807
ENSMODG00000024570 Monodelphis domestica ENSMODG00000024570 I 0.799
ENSRNOG00000030250 Rattus norvegicus ENSRNOG00000030250 I 0.796
D4A8U2_RAT Rattus norvegicus ENSRNOG00000007252 I 0.793
ENSCAFG00000023240 Canis familiaris ENSCAFG00000023240 I 0.779
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.779
LOC100066794 Equus caballus ENSECAG00000023237 I 0.777
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.777
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.777
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.772
LOC781499 Bos taurus ENSBTAG00000021580 I 0.772
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.772
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.772
HNRNPA3 Homo sapiens ENSG00000170144 I 0.772
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.772
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.772
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.772
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.772
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.772
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.772
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.772
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.772
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.772
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.772
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.772
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.772
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.772
ENSRNOG00000024652 Rattus norvegicus ENSRNOG00000024652 I 0.771
Gm8991 Mus musculus ENSMUSG00000059179 I 0.770
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.770
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.770
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.770
ENSOCUG00000006431 Oryctolagus cuniculus ENSOCUG00000006431 I 0.769
D3ZB90_RAT Rattus norvegicus ENSRNOG00000038392 N 0.768
D3ZB98_RAT Rattus norvegicus ENSRNOG00000029641 I 0.768
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.765
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.764
D3ZK54_RAT Rattus norvegicus ENSRNOG00000025482 I 0.757
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.757
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.757
ENSEEUG00000000925 Erinaceus europaeus ENSEEUG00000000925 I 0.746
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.745
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.743
ENSTTRG00000015563 Tursiops truncatus ENSTTRG00000015563 I 0.743
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.738
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.738
D4ACP9_RAT Rattus norvegicus ENSRNOG00000021929 I 0.738
AAA49949 Xenopus laevis AAA49949 I 0.736
P51968 Xenopus laevis P51968 I 0.736
D4A6Z0_RAT Rattus norvegicus ENSRNOG00000042924 N 0.736
HNRNPA3 Canis familiaris ENSCAFG00000015889 I 0.729
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.727
CBF67578 Xenopus laevis CBF67578 I 0.727
AAI69881 Xenopus laevis AAI69881 I 0.727
AAA49950 Xenopus laevis AAA49950 I 0.727
CBU92451 Xenopus laevis CBU92451 I 0.727
P51992 Xenopus laevis P51992 I 0.727
D3ZHS1_RAT Rattus norvegicus ENSRNOG00000017364 N 0.723
D3ZX95_RAT Rattus norvegicus ENSRNOG00000027006 I 0.721
ENSRNOG00000022655 Rattus norvegicus ENSRNOG00000022655 N 0.716
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.716
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.714
HNRNPA3 Loxodonta africana ENSLAFG00000027712 I 0.714
ENSDORG00000011155 Dipodomys ordii ENSDORG00000011155 I 0.714
HNRNPA3 Microcebus murinus ENSMICG00000005513 I 0.713
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.709
ENSPPYG00000013564 Pongo pygmaeus ENSPPYG00000013564 N 0.707
Ame_R015370 Ailuropoda melanoleuca Ame_R015370 I 0.706
ENSSSCG00000015989 Sus scrofa ENSSSCG00000015989 I 0.705
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.703