MSI2 (Cavia porcellus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCPOG00000008752 T35809_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000007857 RRM 4 42
ENSCPOP00000007857 RRM 62 131

Links

Other RRM family RBPs
Other Cavia porcellus RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MSI2 Tarsius syrichta ENSTSYG00000011839 N 0.917
LOC100070744 Equus caballus ENSECAG00000011435 I 0.911
msi1 Danio rerio ENSDARG00000010710 I 0.827
ENSMGAG00000008742 Meleagris gallopavo ENSMGAG00000008742 I 0.826
MSI1 Gorilla gorilla ENSGGOG00000010328 I 0.805
MSI2 Pteropus vampyrus ENSPVAG00000017053 I 0.803
amel4_ncbi_hmm21060 Apis mellifera amel4_ncbi_hmm21060 N 0.798
LOC100390978 Callithrix jacchus ENSCJAG00000013998 I 0.767
MSI1 Pan troglodytes ENSPTRG00000005531 I 0.765
MSI2 Canis familiaris ENSCAFG00000017418 I 0.729
MSI2 Pan troglodytes ENSPTRG00000009437 I 0.729
Msi2 Mus musculus ENSMUSG00000069769 I 0.729
MSI2 Oryctolagus cuniculus ENSOCUG00000010440 I 0.729
MSI2 Homo sapiens ENSG00000153944 I 0.729
MSI2 Microcebus murinus ENSMICG00000013598 I 0.729
MSI2 Gorilla gorilla ENSGGOG00000013182 I 0.729
MSI1 Oryctolagus cuniculus ENSOCUG00000027716 I 0.719
MSI1 Felis catus ENSFCAG00000011007 I 0.717
msi2b Danio rerio ENSDARG00000032614 I 0.714
Ame_R019333 Ailuropoda melanoleuca Ame_R019333 I 0.711
MSI1 Macaca mulatta ENSMMUG00000031527 I 0.711
MSI2 Macaca mulatta ENSMMUG00000002069 I 0.710
MSI2 Otolemur garnettii ENSOGAG00000005621 N 0.709
MSI1 Echinops telfairi ENSETEG00000004756 I 0.709
AAA50004 Xenopus laevis AAA50004 I 0.707
AAI69841 Xenopus laevis AAI69841 I 0.707
Msi1 Rattus norvegicus ENSRNOG00000001156 I 0.703
MSI1 Pteropus vampyrus ENSPVAG00000002225 I 0.701