MSI1 (Gorilla gorilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGGOG00000010328 T37840_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MSI1
M167_0.6 		Homo sapiens UAGKWRG RNAcompete
Ray et al.(2013)
RNCMPT00176 		0.807
MSI1
M040_0.6 		Homo sapiens UAGUWRG RNAcompete
Ray et al.(2013)
RNCMPT00041 		0.807
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000010082 RRM 1 43
ENSGGOP00000010082 RRM 63 132

Links

Other RRM family RBPs
Other Gorilla gorilla RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MSI1 Pan troglodytes ENSPTRG00000005531 I 0.950
msi1 Danio rerio ENSDARG00000010710 I 0.912
ENSMGAG00000008742 Meleagris gallopavo ENSMGAG00000008742 I 0.894
MSI1 Felis catus ENSFCAG00000011007 I 0.890
MSI1 Macaca mulatta ENSMMUG00000031527 I 0.883
Ame_R019333 Ailuropoda melanoleuca Ame_R019333 I 0.883
MSI1 Echinops telfairi ENSETEG00000004756 I 0.882
LOC100070744 Equus caballus ENSECAG00000011435 I 0.876
MSI1 Oryctolagus cuniculus ENSOCUG00000027716 I 0.875
Msi1 Rattus norvegicus ENSRNOG00000001156 I 0.875
MSI1 Pteropus vampyrus ENSPVAG00000002225 I 0.874
LOC100053469 Equus caballus ENSECAG00000017526 I 0.852
Msi1 Mus musculus ENSMUSG00000054256 I 0.836
ENSPPYG00000005027 Pongo pygmaeus ENSPPYG00000005027 I 0.813
MSI1 Tursiops truncatus ENSTTRG00000005663 I 0.807
MSI1 Callithrix jacchus ENSCJAG00000008578 I 0.807
MSI1 Homo sapiens ENSG00000135097 D 0.807
MSI1 Taeniopygia guttata ENSTGUG00000009534 I 0.807
MSI1 Cavia porcellus ENSCPOG00000012361 I 0.807
MSI2 Cavia porcellus ENSCPOG00000008752 N 0.805
MSI1 Anolis carolinensis ENSACAG00000002762 I 0.800
CBF67566 Xenopus laevis CBF67566 I 0.793
CBU92439 Xenopus laevis CBU92439 I 0.793
AAH82667 Xenopus laevis AAH82667 I 0.793
AAA49920 Xenopus laevis AAA49920 I 0.793
msi1 Xenopus tropicalis ENSXETG00000012216 I 0.793
MSI1 Canis familiaris ENSCAFG00000010283 I 0.789
MSI2 Tarsius syrichta ENSTSYG00000011839 N 0.788
MSI2 Pteropus vampyrus ENSPVAG00000017053 I 0.787
MSI1 Dasypus novemcinctus ENSDNOG00000005713 I 0.786
AAH84959 Xenopus laevis AAH84959 I 0.786
AAA49919 Xenopus laevis AAA49919 I 0.786
LOC100390978 Callithrix jacchus ENSCJAG00000013998 I 0.752
MSI1 Takifugu rubripes ENSTRUG00000016249 I 0.750
MSI1 Tetraodon nigroviridis ENSTNIG00000011469 I 0.750
MSI1 Gasterosteus aculeatus ENSGACG00000012679 I 0.750
MSI1 Takifugu rubripes ENSTRUG00000015636 I 0.729
amel4_ncbi_hmm21060 Apis mellifera amel4_ncbi_hmm21060 N 0.726
msi2b Danio rerio ENSDARG00000032614 I 0.721
Msi2 Mus musculus ENSMUSG00000069769 I 0.714
MSI2 Microcebus murinus ENSMICG00000013598 I 0.714
MSI2 Homo sapiens ENSG00000153944 I 0.714
MSI2 Oryctolagus cuniculus ENSOCUG00000010440 I 0.714
MSI2 Gorilla gorilla ENSGGOG00000013182 I 0.714
MSI2 Pan troglodytes ENSPTRG00000009437 I 0.714
AAA50004 Xenopus laevis AAA50004 I 0.714
AAI69841 Xenopus laevis AAI69841 I 0.714
msi2a Danio rerio ENSDARG00000033901 I 0.707
MSI2 Macaca mulatta ENSMMUG00000002069 I 0.702
MSI2 Canis familiaris ENSCAFG00000017418 I 0.700