ENSMGAG00000008742 (Meleagris gallopavo)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMGAG00000008742 T38397_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MSI1
M167_0.6 		Homo sapiens UAGKWRG RNAcompete
Ray et al.(2013)
RNCMPT00176 		0.721
MSI1
M040_0.6 		Homo sapiens UAGUWRG RNAcompete
Ray et al.(2013)
RNCMPT00041 		0.721
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000009024 RRM 1 31
ENSMGAP00000009024 RRM 51 120

Links

Other RRM family RBPs
Other Meleagris gallopavo RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MSI1 Gorilla gorilla ENSGGOG00000010328 I 0.894
MSI2 Tarsius syrichta ENSTSYG00000011839 N 0.881
msi1 Danio rerio ENSDARG00000010710 I 0.864
MSI1 Pan troglodytes ENSPTRG00000005531 I 0.849
MSI2 Cavia porcellus ENSCPOG00000008752 N 0.826
LOC100070744 Equus caballus ENSECAG00000011435 I 0.804
MSI1 Felis catus ENSFCAG00000011007 I 0.795
Ame_R019333 Ailuropoda melanoleuca Ame_R019333 I 0.789
MSI1 Macaca mulatta ENSMMUG00000031527 I 0.789
MSI1 Echinops telfairi ENSETEG00000004756 I 0.787
MSI1 Oryctolagus cuniculus ENSOCUG00000027716 I 0.781
Msi1 Rattus norvegicus ENSRNOG00000001156 I 0.781
MSI1 Pteropus vampyrus ENSPVAG00000002225 I 0.780
LOC100053469 Equus caballus ENSECAG00000017526 I 0.758
amel4_ncbi_hmm21060 Apis mellifera amel4_ncbi_hmm21060 N 0.750
Msi1 Mus musculus ENSMUSG00000054256 I 0.746
ENSPPYG00000005027 Pongo pygmaeus ENSPPYG00000005027 I 0.727
MSI1 Cavia porcellus ENSCPOG00000012361 I 0.721
MSI1 Callithrix jacchus ENSCJAG00000008578 I 0.721
MSI1 Homo sapiens ENSG00000135097 D 0.721
MSI1 Tursiops truncatus ENSTTRG00000005663 I 0.721
MSI1 Taeniopygia guttata ENSTGUG00000009534 I 0.721
MSI1 Anolis carolinensis ENSACAG00000002762 I 0.714
MSI2 Pteropus vampyrus ENSPVAG00000017053 I 0.709
AAA49920 Xenopus laevis AAA49920 I 0.707
msi1 Xenopus tropicalis ENSXETG00000012216 I 0.707
AAH82667 Xenopus laevis AAH82667 I 0.707
CBF67566 Xenopus laevis CBF67566 I 0.707
CBU92439 Xenopus laevis CBU92439 I 0.707
MSI1 Canis familiaris ENSCAFG00000010283 I 0.704
AAH84959 Xenopus laevis AAH84959 I 0.700
AAA49919 Xenopus laevis AAA49919 I 0.700
MSI1 Dasypus novemcinctus ENSDNOG00000005713 I 0.700