MSI1 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000010283 T35087_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MSI1
M167_0.6 		Homo sapiens UAGKWRG RNAcompete
Ray et al.(2013)
RNCMPT00176 		0.979
MSI1
M040_0.6 		Homo sapiens UAGUWRG RNAcompete
Ray et al.(2013)
RNCMPT00041 		0.979
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000015120 RRM 22 93
ENSCAFP00000015120 RRM 113 182

Links

Other RRM family RBPs
Other Canis familiaris RBPs

61 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MSI1 Callithrix jacchus ENSCJAG00000008578 I 0.993
MSI1 Cavia porcellus ENSCPOG00000012361 I 0.979
MSI1 Homo sapiens ENSG00000135097 D 0.979
Msi1 Mus musculus ENSMUSG00000054256 I 0.972
MSI1 Anolis carolinensis ENSACAG00000002762 I 0.972
MSI1 Tursiops truncatus ENSTTRG00000005663 I 0.972
MSI1 Taeniopygia guttata ENSTGUG00000009534 I 0.972
MSI1 Dasypus novemcinctus ENSDNOG00000005713 I 0.958
ENSPPYG00000005027 Pongo pygmaeus ENSPPYG00000005027 I 0.951
CBU92439 Xenopus laevis CBU92439 I 0.944
msi1 Xenopus tropicalis ENSXETG00000012216 I 0.944
CBF67566 Xenopus laevis CBF67566 I 0.944
AAH82667 Xenopus laevis AAH82667 I 0.944
AAA49920 Xenopus laevis AAA49920 I 0.944
AAA49919 Xenopus laevis AAA49919 I 0.937
AAH84959 Xenopus laevis AAH84959 I 0.937
Ame_R019333 Ailuropoda melanoleuca Ame_R019333 I 0.894
MSI1 Gasterosteus aculeatus ENSGACG00000012679 I 0.894
MSI1 Takifugu rubripes ENSTRUG00000016249 I 0.894
MSI1 Tetraodon nigroviridis ENSTNIG00000011469 I 0.894
MSI1 Macaca mulatta ENSMMUG00000031527 I 0.894
Msi1 Rattus norvegicus ENSRNOG00000001156 I 0.887
MSI1 Felis catus ENSFCAG00000011007 I 0.887
MSI1 Oryctolagus cuniculus ENSOCUG00000027716 I 0.887
MSI1 Echinops telfairi ENSETEG00000004756 I 0.880
MSI1 Takifugu rubripes ENSTRUG00000015636 I 0.880
MSI1 Pteropus vampyrus ENSPVAG00000002225 I 0.873
LOC100053469 Equus caballus ENSECAG00000017526 I 0.866
msi2b Danio rerio ENSDARG00000032614 I 0.831
MSI1 Pan troglodytes ENSPTRG00000005531 I 0.831
AAA50004 Xenopus laevis AAA50004 I 0.824
Msi2 Mus musculus ENSMUSG00000069769 I 0.824
MSI2 Microcebus murinus ENSMICG00000013598 I 0.824
MSI2 Homo sapiens ENSG00000153944 I 0.824
MSI2 Oryctolagus cuniculus ENSOCUG00000010440 I 0.824
MSI2 Gorilla gorilla ENSGGOG00000013182 I 0.824
AAI69841 Xenopus laevis AAI69841 I 0.824
MSI2 Pan troglodytes ENSPTRG00000009437 I 0.824
MSI2 Canis familiaris ENSCAFG00000017418 I 0.817
msi2a Danio rerio ENSDARG00000033901 I 0.817
msi1 Danio rerio ENSDARG00000010710 I 0.803
estExt_Genewise1Plus.C_620039 Capitella teleta estExt_Genewise1Plus.C_620039 I 0.796
MSI1 Gorilla gorilla ENSGGOG00000010328 I 0.789
gw1.72.166.1 Daphnia pulex gw1.72.166.1 I 0.768
LOC100390978 Callithrix jacchus ENSCJAG00000013998 I 0.761
MSI2 Pteropus vampyrus ENSPVAG00000017053 I 0.754
ENSGACG00000008674 Gasterosteus aculeatus ENSGACG00000008674 I 0.734
Rbp6 Drosophila melanogaster FBgn0260943 I 0.732
GG15829 Drosophila erecta FBgn0108068 I 0.732
GF24401 Drosophila ananassae FBgn0101395 I 0.732
GI12835 Drosophila mojavensis FBgn0135592 I 0.732
GH15068 Drosophila grimshawi FBgn0122543 I 0.732
GM24349 Drosophila sechellia FBgn0179213 I 0.732
GK18043 Drosophila willistoni FBgn0220042 I 0.732
GE22169 Drosophila yakuba FBgn0239397 I 0.732
GD12423 Drosophila simulans FBgn0184155 I 0.732
MSI1 Loxodonta africana ENSLAFG00000009412 I 0.725
msi-1 Caenorhabditis elegans R10E9.1 I 0.711
CBN10423 Caenorhabditis brenneri CBN10423 I 0.704
MSI1 Ochotona princeps ENSOPRG00000016879 I 0.704
ENSMGAG00000008742 Meleagris gallopavo ENSMGAG00000008742 I 0.704