Medtr7g127590 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr7g127590 T54593_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr7g127590.1 RRM 103 170
Medtr7g127590.1 RRM 180 250
Medtr7g127590.1 RRM 274 344

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma03g35450.1 Glycine max Glyma03g35450.1 N 0.840
chr1.CM0010.50.nc Lotus japonicus chr1.CM0010.50.nc N 0.831
MDP0000851531 Malus x domestica MDP0000851531 N 0.779
MDP0000181657 Malus x domestica MDP0000181657 N 0.775
ppa004785m Prunus persica ppa004785m N 0.775
mgf001576m Mimulus guttatus mgf001576m N 0.765
PK04414.1 Cannabis sativa PK04414.1 N 0.756
cassava21692.m1 Manihot esculenta cassava21692.m1 N 0.751
cassava19191.valid.m1 Manihot esculenta cassava19191.valid.m1 N 0.751
cassava21693.m1 Manihot esculenta cassava21693.m1 N 0.751
cassava29630.valid.m1 Manihot esculenta cassava29630.valid.m1 N 0.746
GSVIVG00036119001 Vitis vinifera GSVIVG00036119001 N 0.743
B9IIU5_POPTR Populus trichocarpa POPTR_0016s08010 N 0.742
28629.m000549 Ricinus communis 28629.m000549 N 0.742
cassava19192.valid.m1 Manihot esculenta cassava19192.valid.m1 N 0.737
B9HC85_POPTR Populus trichocarpa POPTR_0006s22890 N 0.737
GSVIVG00033857001 Vitis vinifera GSVIVG00033857001 N 0.724
Cucsa.185730 Cucumis sativus Cucsa.185730 N 0.714
PK05405.1 Cannabis sativa PK05405.1 N 0.704