GSVIVG00033857001 (Vitis vinifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSVIVG00033857001 T44772_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00033857001 RRM 94 164
GSVIVT00033857001 RRM 174 245
GSVIVT00033857001 RRM 268 338

Links

Other RRM family RBPs
Other Vitis vinifera RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000181657 Malus x domestica MDP0000181657 N 0.804
MDP0000851531 Malus x domestica MDP0000851531 N 0.804
cassava29630.valid.m1 Manihot esculenta cassava29630.valid.m1 N 0.804
ppa004785m Prunus persica ppa004785m N 0.799
cassava21693.m1 Manihot esculenta cassava21693.m1 N 0.790
cassava21692.m1 Manihot esculenta cassava21692.m1 N 0.790
cassava19191.valid.m1 Manihot esculenta cassava19191.valid.m1 N 0.790
GSVIVG00036119001 Vitis vinifera GSVIVG00036119001 N 0.790
PK04414.1 Cannabis sativa PK04414.1 N 0.785
B9IIU5_POPTR Populus trichocarpa POPTR_0016s08010 N 0.785
cassava19192.valid.m1 Manihot esculenta cassava19192.valid.m1 N 0.776
28629.m000549 Ricinus communis 28629.m000549 N 0.776
Glyma03g35450.1 Glycine max Glyma03g35450.1 N 0.766
B9HC85_POPTR Populus trichocarpa POPTR_0006s22890 N 0.766
mgf001576m Mimulus guttatus mgf001576m N 0.752
PDK_20s1316982g002 Phoenix dactylifera PDK_20s1316982g002 N 0.743
Cucsa.185730 Cucumis sativus Cucsa.185730 N 0.729
PK05405.1 Cannabis sativa PK05405.1 N 0.724
Medtr7g127590 Medicago truncatula Medtr7g127590 N 0.724
chr1.CM0010.50.nc Lotus japonicus chr1.CM0010.50.nc N 0.724
ppa004677m Prunus persica ppa004677m N 0.706