28629.m000549 (Ricinus communis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 28629.m000549 T48637_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
28629.m000549 RRM 112 182
28629.m000549 RRM 192 262
28629.m000549 RRM 286 356

Links

Other RRM family RBPs
Other Ricinus communis RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava19191.valid.m1 Manihot esculenta cassava19191.valid.m1 N 0.864
cassava21693.m1 Manihot esculenta cassava21693.m1 N 0.864
cassava29630.valid.m1 Manihot esculenta cassava29630.valid.m1 N 0.864
cassava21692.m1 Manihot esculenta cassava21692.m1 N 0.864
cassava19192.valid.m1 Manihot esculenta cassava19192.valid.m1 N 0.850
B9IIU5_POPTR Populus trichocarpa POPTR_0016s08010 N 0.840
B9HC85_POPTR Populus trichocarpa POPTR_0006s22890 N 0.826
ppa004785m Prunus persica ppa004785m N 0.822
MDP0000851531 Malus x domestica MDP0000851531 N 0.817
MDP0000181657 Malus x domestica MDP0000181657 N 0.817
mgf001576m Mimulus guttatus mgf001576m N 0.789
PK04414.1 Cannabis sativa PK04414.1 N 0.784
GSVIVG00033857001 Vitis vinifera GSVIVG00033857001 N 0.776
GSVIVG00036119001 Vitis vinifera GSVIVG00036119001 N 0.771
Glyma03g35450.1 Glycine max Glyma03g35450.1 N 0.770
PK05405.1 Cannabis sativa PK05405.1 N 0.746
Medtr7g127590 Medicago truncatula Medtr7g127590 N 0.742
Cucsa.185730 Cucumis sativus Cucsa.185730 N 0.728
PDK_20s1316982g002 Phoenix dactylifera PDK_20s1316982g002 N 0.728
chr1.CM0010.50.nc Lotus japonicus chr1.CM0010.50.nc N 0.718
ppa004677m Prunus persica ppa004677m N 0.714