BGIOSIBCE012954 (Oryza indica)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 BGIOSIBCE012954 T61942_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE012954 YTH 502 584

Links

Other YTH family RBPs
Other Oryza indica RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os03g53670 Oryza sativa LOC_Os03g53670 N 0.835
BRADI4G02150 Brachypodium distachyon BRADI4G02150 N 0.791
SB01G008170 Sorghum bicolor Sb01g008170 N 0.791
GRMZM2G126338 Zea mays GRMZM2G126338 N 0.780
PDK_20s1308332g001 Phoenix dactylifera PDK_20s1308332g001 N 0.769
30169.m006347 Ricinus communis 30169.m006347 N 0.747
Glyma08g13130.1 Glycine max Glyma08g13130.1 N 0.736
PDK_20s1441394g001 Phoenix dactylifera PDK_20s1441394g001 N 0.729
Glyma05g30020.1 Glycine max Glyma05g30020.1 N 0.725
B9GLB9_POPTR Populus trichocarpa POPTR_0001s03940 N 0.723
LjSGA_011466.1 Lotus japonicus LjSGA_011466.1 N 0.723
mgf013935m Mimulus guttatus mgf013935m N 0.714
mgf009938m Mimulus guttatus mgf009938m N 0.714
GRMZM2G076062 Zea mays GRMZM2G076062 N 0.714
mgf013853m Mimulus guttatus mgf013853m N 0.714
GRMZM2G330019 Zea mays GRMZM2G330019 N 0.714
BGIOSIBCE009738 Oryza indica BGIOSIBCE009738 N 0.714
GSVIVG00025494001 Vitis vinifera GSVIVG00025494001 N 0.714
PK23716.1 Cannabis sativa PK23716.1 N 0.714
Sb01g046550 Sorghum bicolor Sb01g046550 N 0.714
LOC_Os03g06240 Oryza sativa LOC_Os03g06240 N 0.714
cassava38866.m1 Manihot esculenta cassava38866.m1 N 0.703
cassava38867.m1 Manihot esculenta cassava38867.m1 N 0.703
Cucsa.142200 Cucumis sativus Cucsa.142200 N 0.703
cassava35667.valid.m1 Manihot esculenta cassava35667.valid.m1 N 0.703
cassava35661.valid.m1 Manihot esculenta cassava35661.valid.m1 N 0.703
cassava12389.valid.m1 Manihot esculenta cassava12389.valid.m1 N 0.703
cassava30727.valid.m1 Manihot esculenta cassava30727.valid.m1 N 0.703
cassava30728.valid.m1 Manihot esculenta cassava30728.valid.m1 N 0.703
cassava12388.valid.m1 Manihot esculenta cassava12388.valid.m1 N 0.703
cassava12387.valid.m1 Manihot esculenta cassava12387.valid.m1 N 0.703
BRADI1G74560 Brachypodium distachyon BRADI1G74560 N 0.703
cassava12386.valid.m1 Manihot esculenta cassava12386.valid.m1 N 0.703
cassava30729.valid.m1 Manihot esculenta cassava30729.valid.m1 N 0.703
cassava35657.valid.m1 Manihot esculenta cassava35657.valid.m1 N 0.703
cassava35662.valid.m1 Manihot esculenta cassava35662.valid.m1 N 0.703
cassava35663.valid.m1 Manihot esculenta cassava35663.valid.m1 N 0.703
cassava35665.valid.m1 Manihot esculenta cassava35665.valid.m1 N 0.703
BRADI1G05970 Brachypodium distachyon BRADI1G05970 N 0.703
cassava35660.valid.m1 Manihot esculenta cassava35660.valid.m1 N 0.703
cassava35658.valid.m1 Manihot esculenta cassava35658.valid.m1 N 0.703
cassava35659.valid.m1 Manihot esculenta cassava35659.valid.m1 N 0.703
cassava35666.valid.m1 Manihot esculenta cassava35666.valid.m1 N 0.703