ENSETEG00000004125 (Echinops telfairi)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 ENSETEG00000004125 T16840_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
YB-1
M111_0.6 		Homo sapiens AACAUCD RNAcompete
Ray et al.(2013)
RNCMPT00116 		0.718
YB-1
M081_0.6 		Homo sapiens AACAUC RNAcompete
Ray et al.(2013)
RNCMPT00083 		0.718
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000003382 CSD 76 128

Links

Other CSD family RBPs
Other Echinops telfairi RBPs

92 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH77935 Xenopus laevis AAH77935 I 0.000
AAH81071 Xenopus laevis AAH81071 I 0.000
Ame_R012008 Ailuropoda melanoleuca Ame_R012008 I 0.000
FUS Anolis carolinensis ENSACAG00000006776 I 0.000
FUS_BOVIN Bos taurus ENSBTAG00000005757 I 0.000
TAF15 Bos taurus ENSBTAG00000006916 I 0.000
FUS Canis familiaris ENSCAFG00000016862 I 0.000
TAF15 Canis familiaris ENSCAFG00000018176 I 0.000
FUS Choloepus hoffmanni ENSCHOG00000010780 I 0.000
ENSCJAG00000002807 Callithrix jacchus ENSCJAG00000002807 I 0.000
LOC100395517 Callithrix jacchus ENSCJAG00000003169 I 0.000
LOC100391580 Callithrix jacchus ENSCJAG00000014961 I 0.000
TAF15 Cavia porcellus ENSCPOG00000010259 I 0.000
TAF15 Danio rerio ENSDARG00000070019 I 0.000
TAF15 Dasypus novemcinctus ENSDNOG00000006956 I 0.000
LOC100071562 Equus caballus ENSECAG00000000718 I 0.000
FUS Erinaceus europaeus ENSEEUG00000004934 I 0.000
TAF15 Echinops telfairi ENSETEG00000001337 N 0.000
FUS Homo sapiens ENSG00000089280 D 0.000
TAF15 Homo sapiens ENSG00000172660 I 0.000
TAF15 Gallus gallus ENSGALG00000002060 I 0.000
FUS Gorilla gorilla ENSGGOG00000003707 I 0.000
TAF15 Gorilla gorilla ENSGGOG00000005693 I 0.000
TAF15 Loxodonta africana ENSLAFG00000018332 I 0.000
TAF15 Macropus eugenii ENSMEUG00000006009 I 0.000
TAF15 Meleagris gallopavo ENSMGAG00000003842 I 0.000
TAF15 Myotis lucifugus ENSMLUG00000002870 I 0.000
TAF15 Macaca mulatta ENSMMUG00000003305 I 0.000
FUS Macaca mulatta ENSMMUG00000019637 I 0.000
FUS Monodelphis domestica ENSMODG00000001889 I 0.000
TAF15 Monodelphis domestica ENSMODG00000019123 I 0.000
Taf15 Mus musculus ENSMUSG00000020680 I 0.000
Fus Mus musculus ENSMUSG00000030795 I 0.000
FUS Ornithorhynchus anatinus ENSOANG00000005606 I 0.000
TAF15 Ornithorhynchus anatinus ENSOANG00000014273 I 0.000
TAF15 Oryctolagus cuniculus ENSOCUG00000002838 I 0.000
FUS Oryctolagus cuniculus ENSOCUG00000021526 I 0.000
TAF15 Otolemur garnettii ENSOGAG00000011719 N 0.000
TAF15 Procavia capensis ENSPCAG00000009582 I 0.000
ENSPPYG00000008194 Pongo pygmaeus ENSPPYG00000008194 I 0.000
FUS Pan troglodytes ENSPTRG00000008038 I 0.000
TAF15 Pan troglodytes ENSPTRG00000009026 I 0.000
FUS Pteropus vampyrus ENSPVAG00000003097 I 0.000
TAF15 Pteropus vampyrus ENSPVAG00000003952 I 0.000
Taf15 Rattus norvegicus ENSRNOG00000010604 I 0.000
ENSRNOG00000024836 Rattus norvegicus ENSRNOG00000024836 I 0.000
TAF15 Sorex araneus ENSSARG00000012092 I 0.000
FUS Sus scrofa ENSSSCG00000007759 I 0.000
TAF15 Sus scrofa ENSSSCG00000017707 I 0.000
TAF15 Taeniopygia guttata ENSTGUG00000004702 I 0.000
FUS Tarsius syrichta ENSTSYG00000011757 I 0.000
TAF15 Tursiops truncatus ENSTTRG00000014145 I 0.000
fus Xenopus tropicalis ENSXETG00000001951 I 0.000