CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSACAG00000003606
(
Anolis carolinensis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSACAG00000003606
T18402_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000003753
KH
98
141
EAKVCVDIMQKTGAHIELSLAKDQGLSIMVTGKLDSVMKARKEI
ENSACAP00000003753
KH
150
210
SATVTIPKEHHRFVIGKNGEKLQELELKTATKINIPRPEDPSNQIKITGTKEGIEKARHEI
ENSACAP00000003753
KH
222
282
VERVNLEKAFHPFIAGAFNKVVQEIMQDTGARINIPPPSVNKDEIIITGEKEPVSQALLRI
ENSACAP00000003753
KH
295
354
TISVEVKKSQHKYIIGPKGNTLQEILDATGVSVEMPPLESSSETIILRGEPDKLGPALTQ
ENSACAP00000003753
KH
364
424
VAEVTAPAWLHRFIIGKKGQNIGRITQQLPKAGVHIEFTDGDEKITLEGPTEEVELAQAQI
ENSACAP00000003753
KH
437
497
YTEVLIDQRFHRHLIGKNGANINRIKEQHKVSVRIPPDNEKSNLIRIEGDPQGVQLARKEL
ENSACAP00000003753
KH
509
570
TKDLIIEQRFHRTIIGQKGEKIKEIRDKFPEVIINFPDPSQKSDIVQLRGPKNEVEKCAKYL
ENSACAP00000003753
KH
583
643
SIPVPIFKQFHKNIIGKGGANIKKIREETNTKIDLPTENSNSEVILITGKKVNCEGARDRI
ENSACAP00000003753
KH
655
716
EVDVSIPAKLHNSLIGAKGRLVRSIMEECGGVHIHFPSEGSGSDKVTIRGPGEEVEKAKRQL
ENSACAP00000003753
KH
729
790
SVELHAKPEYHKFLIGRGGANIRKVRDRTGARIIFPTAEDKDQELITIVGKEESVRQAQYEL
ENSACAP00000003753
KH
805
863
MLVDPKYHRHFVARRGHVLREIAEEYGGVTVSFPRTGVQSDRVTLKGAKDCVEAAKKRI
ENSACAP00000003753
KH
875
960
VLECIIPQRFHRVVMGAKGYKVQQITRDHDVLIKFPERDDNSGLCLEAQSQENGDVSPELDSVPRKCDIILISGRKEKCEAARSAL
ENSACAP00000003753
KH
967
1027
TMDVDVPFDLHRYIIGQKGAGIRKMMEEYEVNISVPQPEQQSDIIKITGLVPNVERARAGL
ENSACAP00000003753
KH
1047
1110
KLMVSVEPKYHPKIIGKKGAVISQIRKDHDVTIQFPDKGDENQEKDLITITGYEKNAEGARDAI
ENSACAP00000003753
KH
1122
1183
SEDIRLDHRVHARIIGGRGKAIRKLMEEFRVDIRFPQPGSSDPDRVTVTGLPENVDDAIDHM
Links
Other
KH
family RBPs
Other
Anolis carolinensis
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH44314
Xenopus laevis
AAH44314
N
0.759
Ame_R011476
Ailuropoda melanoleuca
Ame_R011476
N
0.762
HDLBP
Canis familiaris
ENSCAFG00000012913
N
0.762
HDLBP
Callithrix jacchus
ENSCJAG00000006152
N
0.761
HDLBP
Cavia porcellus
ENSCPOG00000006297
N
0.762
hdlbp
Danio rerio
ENSDARG00000009830
N
0.752
LOC100057882
Equus caballus
ENSECAG00000012829
N
0.762
HDLBP
Felis catus
ENSFCAG00000010455
N
0.704
HDLBP
Homo sapiens
ENSG00000115677
N
0.766
HDLBP
Gasterosteus aculeatus
ENSGACG00000004648
N
0.745
ENSGACG00000019361
Gasterosteus aculeatus
ENSGACG00000019361
N
0.796
VIGLN_CHICK
Gallus gallus
ENSGALG00000005823
N
0.767
HDLBP
Gorilla gorilla
ENSGGOG00000004392
N
0.766
HDLBP
Loxodonta africana
ENSLAFG00000014826
N
0.757
HDLBP
Meleagris gallopavo
ENSMGAG00000003686
N
0.766
HDLBP
Myotis lucifugus
ENSMLUG00000005628
N
0.744
HDLBP
Monodelphis domestica
ENSMODG00000016033
N
0.770
Hdlbp
Mus musculus
ENSMUSG00000034088
N
0.765
ENSOANG00000011759
Ornithorhynchus anatinus
ENSOANG00000011759
N
0.764
HDLBP
Oryctolagus cuniculus
ENSOCUG00000012667
N
0.764
HDLBP
Ochotona princeps
ENSOPRG00000011965
N
0.765
HDLBP
Oryzias latipes
ENSORLG00000002226
N
0.753
ENSORLG00000006581
Oryzias latipes
ENSORLG00000006581
N
0.808
ENSPPYG00000013351
Pongo pygmaeus
ENSPPYG00000013351
N
0.759
HDLBP
Pan troglodytes
ENSPTRG00000013121
N
0.765
HDLBP
Pteropus vampyrus
ENSPVAG00000000555
N
0.757
Hdlbp
Rattus norvegicus
ENSRNOG00000031479
N
0.762
ENSTNIG00000002555
Tetraodon nigroviridis
ENSTNIG00000002555
N
0.801
HDLBP
Tetraodon nigroviridis
ENSTNIG00000004185
N
0.740
HDLBP
Takifugu rubripes
ENSTRUG00000012148
N
0.740
ENSTRUG00000012888
Takifugu rubripes
ENSTRUG00000012888
N
0.798
hdlbp
Xenopus tropicalis
ENSXETG00000012164
N
0.758