HDLBP (Takifugu rubripes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTRUG00000012148 T19652_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000030743 KH 101 146
ENSTRUP00000030743 KH 155 215
ENSTRUP00000030743 KH 227 287
ENSTRUP00000030743 KH 300 360
ENSTRUP00000030743 KH 371 427
ENSTRUP00000030743 KH 440 500
ENSTRUP00000030743 KH 512 573
ENSTRUP00000030743 KH 586 646
ENSTRUP00000030743 KH 658 719
ENSTRUP00000030743 KH 732 793
ENSTRUP00000030743 KH 805 866
ENSTRUP00000030743 KH 878 968
ENSTRUP00000030743 KH 975 1035
ENSTRUP00000030743 KH 1055 1116
ENSTRUP00000030743 KH 1128 1189

Links

Other KH family RBPs
Other Takifugu rubripes RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.950
HDLBP Oryzias latipes ENSORLG00000002226 N 0.912
HDLBP Gasterosteus aculeatus ENSGACG00000004648 N 0.896
hdlbp Danio rerio ENSDARG00000009830 N 0.881
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.811
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.810
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.798
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.798
HDLBP Canis familiaris ENSCAFG00000012913 N 0.791
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.790
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.789
LOC100057882 Equus caballus ENSECAG00000012829 N 0.789
Hdlbp Mus musculus ENSMUSG00000034088 N 0.787
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.787
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.786
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.785
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.785
HDLBP Homo sapiens ENSG00000115677 N 0.785
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.784
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.784
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.782
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.780
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.779
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.777
AAH44314 Xenopus laevis AAH44314 N 0.776
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.765
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.740
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.732
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.728
ENSTNIG00000002555 Tetraodon nigroviridis ENSTNIG00000002555 N 0.726
HDLBP Felis catus ENSFCAG00000010455 N 0.724
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.711