HDLBP (Oryzias latipes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSORLG00000002226 T19274_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000002774 KH 100 145
ENSORLP00000002774 KH 154 214
ENSORLP00000002774 KH 226 286
ENSORLP00000002774 KH 299 359
ENSORLP00000002774 KH 368 426
ENSORLP00000002774 KH 439 499
ENSORLP00000002774 KH 511 572
ENSORLP00000002774 KH 585 645
ENSORLP00000002774 KH 657 718
ENSORLP00000002774 KH 731 792
ENSORLP00000002774 KH 804 865
ENSORLP00000002774 KH 877 968
ENSORLP00000002774 KH 975 1035
ENSORLP00000002774 KH 1055 1119
ENSORLP00000002774 KH 1131 1192

Links

Other KH family RBPs
Other Oryzias latipes RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44314 Xenopus laevis AAH44314 N 0.780
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.804
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.753
HDLBP Canis familiaris ENSCAFG00000012913 N 0.802
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.797
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.802
hdlbp Danio rerio ENSDARG00000009830 N 0.897
LOC100057882 Equus caballus ENSECAG00000012829 N 0.800
HDLBP Felis catus ENSFCAG00000010455 N 0.739
HDLBP Homo sapiens ENSG00000115677 N 0.801
HDLBP Gasterosteus aculeatus ENSGACG00000004648 N 0.905
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.709
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.822
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.801
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.798
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.823
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.775
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.809
Hdlbp Mus musculus ENSMUSG00000034088 N 0.803
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.813
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.799
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.800
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.729
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.793
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.800
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.794
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.803
ENSTNIG00000002555 Tetraodon nigroviridis ENSTNIG00000002555 N 0.722
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.910
HDLBP Takifugu rubripes ENSTRUG00000012148 N 0.912
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.727
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.784