FUBP3 (Tetraodon nigroviridis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTNIG00000009019 T19609_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000011875 KH 77 139
ENSTNIP00000011875 KH 162 226
ENSTNIP00000011875 KH 253 315
ENSTNIP00000011875 KH 350 415

Links

Other KH family RBPs
Other Tetraodon nigroviridis RBPs

74 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44277 Xenopus laevis AAH44277 I 0.702
AAH60400 Xenopus laevis AAH60400 N 0.825
AAH70981 Xenopus laevis AAH70981 I 0.713
AAI69815 Xenopus laevis AAI69815 I 0.713
Ame_R003042 Ailuropoda melanoleuca Ame_R003042 N 0.821
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.722
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.733
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.725
A6QP83_BOVIN Bos taurus ENSBTAG00000013072 N 0.809
FUBP3 Canis familiaris ENSCAFG00000019942 N 0.817
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.725
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.725
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.725
LOC100399862 Callithrix jacchus ENSCJAG00000020542 N 0.817
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.725
FUBP3 Cavia porcellus ENSCPOG00000010315 N 0.798
ENSDARG00000007049 Danio rerio ENSDARG00000007049 N 0.860
fubp1 Danio rerio ENSDARG00000029248 I 0.717
FUBP3 Dasypus novemcinctus ENSDNOG00000014533 N 0.805
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.725
FUBP1 Equus caballus ENSECAG00000010867 I 0.725
LOC100069755 Equus caballus ENSECAG00000011500 N 0.790
FUBP3 Felis catus ENSFCAG00000005113 N 0.805
FUBP3 Homo sapiens ENSG00000107164 N 0.813
FUBP1 Homo sapiens ENSG00000162613 I 0.721
ENSGACG00000016563 Gasterosteus aculeatus ENSGACG00000016563 I 0.700
FUBP3 Gasterosteus aculeatus ENSGACG00000016704 N 0.953
Q5ZM76_CHICK Gallus gallus ENSGALG00000003941 N 0.833
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.722
FUBP3 Gorilla gorilla ENSGGOG00000011318 N 0.813
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.721
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.725
FUBP3 Loxodonta africana ENSLAFG00000011611 N 0.817
FUBP3 Meleagris gallopavo ENSMGAG00000005342 N 0.833
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.717
FUBP3 Microcebus murinus ENSMICG00000015452 N 0.825
FUBP3 Myotis lucifugus ENSMLUG00000008743 N 0.759
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.725
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.721
FUBP3 Macaca mulatta ENSMMUG00000008249 N 0.813
FUBP3 Monodelphis domestica ENSMODG00000012105 N 0.821
Fubp3 Mus musculus ENSMUSG00000026843 N 0.813
Fubp1 Mus musculus ENSMUSG00000028034 I 0.721
FUBP3 Ornithorhynchus anatinus ENSOANG00000001042 N 0.833
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.725
FUBP3 Otolemur garnettii ENSOGAG00000007555 N 0.716
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.725
FUBP3 Ochotona princeps ENSOPRG00000008648 N 0.805
ENSORLG00000003540 Oryzias latipes ENSORLG00000003540 I 0.709
FUBP3 Oryzias latipes ENSORLG00000007103 N 0.953
FUBP3 Oryzias latipes ENSORLG00000017565 N 0.813
FUBP3 Procavia capensis ENSPCAG00000001717 N 0.790
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.725
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.721
ENSPPYG00000019693 Pongo pygmaeus ENSPPYG00000019693 N 0.813
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.721
FUBP3 Pan troglodytes ENSPTRG00000021474 N 0.813
FUBP3 Pteropus vampyrus ENSPVAG00000001510 N 0.813
Fubp3 Rattus norvegicus ENSRNOG00000009139 N 0.813
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.725
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.725
FUBP3 Sus scrofa ENSSSCG00000005702 N 0.704
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.725
FUBP3 Taeniopygia guttata ENSTGUG00000004662 N 0.825
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.708
FUBP3 Tetraodon nigroviridis ENSTNIG00000005858 N 0.805
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.713
FUBP3 Takifugu rubripes ENSTRUG00000013259 N 0.786
FUBP3 Takifugu rubripes ENSTRUG00000018658 N 0.981
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.725
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.725
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.725
fubp3 Xenopus tropicalis ENSXETG00000001344 N 0.833
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.717