SJAG_01064 (Schizosaccharomyces japonicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SJAG_01064 T30530_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SJAG_01064T0 RRM 34 104

Links

Other RRM family RBPs
Other Schizosaccharomyces japonicus RBPs

83 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.732
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.704
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.803
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.789
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.831
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.803
An12g03930 Aspergillus niger CADANGAG00009835 N 0.789
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.803
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.789
CNBG_4502 Cryptococcus neoformans CNBG_4502 N 0.000
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.789
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.789
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.000
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.817
estExt_fgenesh2_kg.C_120041 Serpula lacrymans estExt_fgenesh2_kg.C_120041 N 0.727
estExt_fgenesh2_kg.C_20664 Agaricus bisporus estExt_fgenesh2_kg.C_20664 N 0.000
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.789
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.789
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.803
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.789
estExt_Genewise1_worm.C_60324 Laccaria bicolor estExt_Genewise1_worm.C_60324 N 0.727
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.817
e_gw1.121.83.1 Postia placenta e_gw1.121.83.1 N 0.714
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.831
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.803
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.732
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.803
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.789
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.761
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.789
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.817
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.789
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.803
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.704
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.704
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.761
gw1.1.2136.1 Pleurotus ostreatus gw1.1.2136.1 N 0.727
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.789
gwh2.1.1054.1 Phanerochaete chrysosporium gwh2.1.1054.1 N 0.701
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.789
MCYG_04468 Microsporum canis MCYG_04468 N 0.789
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.775
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.789
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.704
NCU00210 Neurospora crassa NCU00210 N 0.789
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.789
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.789
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.803
PGTG_01720 Puccinia graminis PGTG_01720 N 0.746
PHUM535920 Pediculus humanus PHUM535920 N 0.718
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.803
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.789
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.789
cbc2 Schizosaccharomyces pombe SPBC13A2.01c N 0.859
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.775
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.803
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.789
TERG_03424 Trichophyton rubrum TERG_03424 N 0.789
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.775
UM04861 Ustilago maydis UM04861 N 0.000
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.761
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.761