PK28733.1 (Cannabis sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PK28733.1 T31795_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK28733.1 RRM 170 240
PK28733.1 RRM 264 334

Links

Other RRM family RBPs
Other Cannabis sativa RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30147.m013835 Ricinus communis 30147.m013835 N 0.789
ATRBP31 Arabidopsis thaliana AT4G24770-TAIR-G N 0.754
CP31B Arabidopsis thaliana AT5G50250-TAIR-G N 0.754
BRADI4G38260 Brachypodium distachyon BRADI4G38260 N 0.746
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.782
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.775
cassava512.valid.m1 Manihot esculenta cassava512.valid.m1 N 0.746
Cucsa.196330 Cucumis sativus Cucsa.196330 N 0.789
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.796
Glyma04g36420.1 Glycine max Glyma04g36420.1 N 0.761
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.739
Glyma06g18470.1 Glycine max Glyma06g18470.1 N 0.775
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.761
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.761
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.761
GSVIVG00032361001 Vitis vinifera GSVIVG00032361001 N 0.775
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.732
MDP0000218595 Malus x domestica MDP0000218595 N 0.739
MDP0000224531 Malus x domestica MDP0000224531 N 0.704
MDP0000296631 Malus x domestica MDP0000296631 N 0.739
MDP0000299693 Malus x domestica MDP0000299693 N 0.739
MDP0000919119 Malus x domestica MDP0000919119 N 0.739
mgf001484m Mimulus guttatus mgf001484m N 0.746
mgf008267m Mimulus guttatus mgf008267m N 0.768
PK05280.1 Cannabis sativa PK05280.1 N 0.782
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.725
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.761
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.732
ppa008913m Prunus persica ppa008913m N 0.754
ppa009286m Prunus persica ppa009286m N 0.782
SB02G011330 Sorghum bicolor Sb02g011330 N 0.725
XM_002865734.1 Arabidopsis lyrata scaffold_801433.1 N 0.782