CP31B (Arabidopsis thaliana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AT5G50250-TAIR-G T32840_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT5G50250.1-P RRM 115 185
AT5G50250.1-P RRM 209 279

Links

Other RRM family RBPs
Other Arabidopsis thaliana RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002865734.1 Arabidopsis lyrata scaffold_801433.1 N 0.915
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.859
ATRBP31 Arabidopsis thaliana AT4G24770-TAIR-G N 0.824
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.803
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.803
Glyma06g18470.1 Glycine max Glyma06g18470.1 N 0.796
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.796
30147.m013835 Ricinus communis 30147.m013835 N 0.796
mgf008267m Mimulus guttatus mgf008267m N 0.789
Cucsa.196330 Cucumis sativus Cucsa.196330 N 0.782
ppa009286m Prunus persica ppa009286m N 0.782
Glyma04g36420.1 Glycine max Glyma04g36420.1 N 0.775
PK05280.1 Cannabis sativa PK05280.1 N 0.775
GSVIVG00032361001 Vitis vinifera GSVIVG00032361001 N 0.775
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.768
mgf001484m Mimulus guttatus mgf001484m N 0.761
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.761
cassava512.valid.m1 Manihot esculenta cassava512.valid.m1 N 0.761
BRADI4G38260 Brachypodium distachyon BRADI4G38260 N 0.761
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.761
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.754
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.754
MDP0000218595 Malus x domestica MDP0000218595 N 0.754
PK28733.1 Cannabis sativa PK28733.1 N 0.754
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.754
ppa008913m Prunus persica ppa008913m N 0.746
MDP0000919119 Malus x domestica MDP0000919119 N 0.746
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.739
mgf009747m Mimulus guttatus mgf009747m N 0.739
MDP0000528470 Malus x domestica MDP0000528470 N 0.739
SB02G011330 Sorghum bicolor Sb02g011330 N 0.732
MDP0000296631 Malus x domestica MDP0000296631 N 0.718
MDP0000299693 Malus x domestica MDP0000299693 N 0.718