ATRBP31 (Arabidopsis thaliana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AT4G24770-TAIR-G T32787_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT4G24770.1-P RRM 152 222
AT4G24770.1-P RRM 246 316

Links

Other RRM family RBPs
Other Arabidopsis thaliana RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.930
XM_002865734.1 Arabidopsis lyrata scaffold_801433.1 N 0.845
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.824
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.824
CP31B Arabidopsis thaliana AT5G50250-TAIR-G N 0.824
30147.m013835 Ricinus communis 30147.m013835 N 0.817
Glyma06g18470.1 Glycine max Glyma06g18470.1 N 0.817
Cucsa.196330 Cucumis sativus Cucsa.196330 N 0.810
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.803
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.796
Glyma04g36420.1 Glycine max Glyma04g36420.1 N 0.796
ppa009286m Prunus persica ppa009286m N 0.789
GSVIVG00032361001 Vitis vinifera GSVIVG00032361001 N 0.789
PK05280.1 Cannabis sativa PK05280.1 N 0.782
mgf008267m Mimulus guttatus mgf008267m N 0.782
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.775
cassava512.valid.m1 Manihot esculenta cassava512.valid.m1 N 0.775
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.775
BRADI4G38260 Brachypodium distachyon BRADI4G38260 N 0.761
ppa008913m Prunus persica ppa008913m N 0.754
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.754
PK28733.1 Cannabis sativa PK28733.1 N 0.754
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.754
SB02G011330 Sorghum bicolor Sb02g011330 N 0.754
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.754
MDP0000919119 Malus x domestica MDP0000919119 N 0.746
MDP0000218595 Malus x domestica MDP0000218595 N 0.746
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.732
mgf001484m Mimulus guttatus mgf001484m N 0.732
MDP0000528470 Malus x domestica MDP0000528470 N 0.725
MDP0000299693 Malus x domestica MDP0000299693 N 0.725
MDP0000296631 Malus x domestica MDP0000296631 N 0.725
BGIOSIBCE028840 Oryza indica BGIOSIBCE028840 N 0.718
GRMZM2G123234 Zea mays GRMZM2G123234 N 0.718
LOC_Os08g44290 Oryza sativa LOC_Os08g44290 N 0.718
SB07G024400 Sorghum bicolor Sb07g024400 N 0.711