MDP0000299693 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000299693 T57601_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000299693 RRM 779 849
MDP0000299693 RRM 873 938

Links

Other RRM family RBPs
Other Malus x domestica RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000296631 Malus x domestica MDP0000296631 N 1.000
MDP0000224531 Malus x domestica MDP0000224531 N 0.900
ppa009286m Prunus persica ppa009286m N 0.880
cassava512.valid.m1 Manihot esculenta cassava512.valid.m1 N 0.774
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.768
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.761
Glyma04g36420.1 Glycine max Glyma04g36420.1 N 0.761
PK05280.1 Cannabis sativa PK05280.1 N 0.761
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.754
XM_002865734.1 Arabidopsis lyrata scaffold_801433.1 N 0.754
30147.m013835 Ricinus communis 30147.m013835 N 0.746
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.746
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.746
SB02G011330 Sorghum bicolor Sb02g011330 N 0.746
BRADI4G38260 Brachypodium distachyon BRADI4G38260 N 0.745
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.739
PK28733.1 Cannabis sativa PK28733.1 N 0.739
Glyma06g18470.1 Glycine max Glyma06g18470.1 N 0.739
GSVIVG00032361001 Vitis vinifera GSVIVG00032361001 N 0.739
MDP0000528470 Malus x domestica MDP0000528470 N 0.736
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.732
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.732
Cucsa.196330 Cucumis sativus Cucsa.196330 N 0.732
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.732
ppa008913m Prunus persica ppa008913m N 0.732
mgf008267m Mimulus guttatus mgf008267m N 0.732
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.732
MDP0000218595 Malus x domestica MDP0000218595 N 0.725
ATRBP31 Arabidopsis thaliana AT4G24770-TAIR-G N 0.725
MDP0000919119 Malus x domestica MDP0000919119 N 0.718
mgf001484m Mimulus guttatus mgf001484m N 0.718
mgf009747m Mimulus guttatus mgf009747m N 0.718
CP31B Arabidopsis thaliana AT5G50250-TAIR-G N 0.718
GRMZM2G123234 Zea mays GRMZM2G123234 N 0.711
LOC_Os08g44290 Oryza sativa LOC_Os08g44290 N 0.704
BGIOSIBCE028840 Oryza indica BGIOSIBCE028840 N 0.704
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.704