nasonia_NCBI_hmm370623 (Nasonia vitripennis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 nasonia_NCBI_hmm370623 T32227_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.822
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.822
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm370623 RRM 5 67
nasonia_NCBI_hmm370623 RRM 124 189

Links

Other RRM family RBPs
Other Nasonia vitripennis RBPs

87 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44265 Xenopus laevis AAH44265 I 0.729
AAH46668 Xenopus laevis AAH46668 I 0.713
Ame_R018370 Ailuropoda melanoleuca Ame_R018370 I 0.736
SRSF6 Anolis carolinensis ENSACAG00000002061 I 0.705
SFRS6_BOVIN Bos taurus ENSBTAG00000008527 I 0.705
A7MB38_BOVIN Bos taurus ENSBTAG00000013309 I 0.736
Q9XSS6_CANFA Canis familiaris ENSCAFG00000009289 N 0.000
SRSF4 Canis familiaris ENSCAFG00000011669 N 0.000
SRSF4 Choloepus hoffmanni ENSCHOG00000013858 N 0.000
LOC100402973 Callithrix jacchus ENSCJAG00000009971 I 0.736
ENSCJAG00000010895 Callithrix jacchus ENSCJAG00000010895 N 0.000
SRSF6 Callithrix jacchus ENSCJAG00000017888 I 0.713
ENSCJAG00000031736 Callithrix jacchus ENSCJAG00000031736 N 0.000
SRSF4 Cavia porcellus ENSCPOG00000007263 I 0.736
srsf6a Danio rerio ENSDARG00000013729 I 0.000
SRSF4 Dasypus novemcinctus ENSDNOG00000000968 I 0.736
SRSF6 Dasypus novemcinctus ENSDNOG00000008410 I 0.713
Srsf6 Dipodomys ordii ENSDORG00000001945 I 0.713
Srsf4 Dipodomys ordii ENSDORG00000002459 I 0.736
SRSF4 Equus caballus ENSECAG00000021350 N 0.000
SRSF4 Erinaceus europaeus ENSEEUG00000008479 I 0.736
SRSF4 Homo sapiens ENSG00000116350 I 0.736
SRSF6 Homo sapiens ENSG00000124193 I 0.713
SRSF4 Gasterosteus aculeatus ENSGACG00000002389 I 0.736
SFRS4 Gallus gallus ENSGALG00000001411 N 0.000
SRSF6 Gorilla gorilla ENSGGOG00000009808 I 0.713
SRSF4 Loxodonta africana ENSLAFG00000002575 I 0.736
SRSF6 Macropus eugenii ENSMEUG00000014615 I 0.705
SRSF4 Meleagris gallopavo ENSMGAG00000002400 I 0.736
SRSF5 Meleagris gallopavo ENSMGAG00000011835 N 0.000
SRSF6 Microcebus murinus ENSMICG00000008537 I 0.705
SRSF4 Microcebus murinus ENSMICG00000008965 N 0.000
SRSF4 Myotis lucifugus ENSMLUG00000014770 I 0.000
SRSF4 Macaca mulatta ENSMMUG00000007110 I 0.736
SRSF6 Monodelphis domestica ENSMODG00000003107 I 0.705
SRSF4 Monodelphis domestica ENSMODG00000011052 I 0.736
Srsf6 Mus musculus ENSMUSG00000016921 I 0.000
Srsf4 Mus musculus ENSMUSG00000028911 I 0.736
SRSF4 Ornithorhynchus anatinus ENSOANG00000015169 N 0.000
SRSF4 Oryctolagus cuniculus ENSOCUG00000001837 I 0.736
SRSF4 Ochotona princeps ENSOPRG00000010098 I 0.729
SRSF6 Oryzias latipes ENSORLG00000003530 I 0.000
SRSF4 Oryzias latipes ENSORLG00000009430 I 0.736
SRSF4 Procavia capensis ENSPCAG00000009879 I 0.736
SRSF6 Procavia capensis ENSPCAG00000010954 I 0.705
ENSPPYG00000001629 Pongo pygmaeus ENSPPYG00000001629 I 0.736
ENSPPYG00000011019 Pongo pygmaeus ENSPPYG00000011019 I 0.713
SRSF4 Pan troglodytes ENSPTRG00000000445 I 0.736
SRSF6 Pteropus vampyrus ENSPVAG00000015232 I 0.000
Sfrs6 Rattus norvegicus ENSRNOG00000006380 I 0.000
Sfrs4 Rattus norvegicus ENSRNOG00000010007 I 0.736
SRSF4 Sus scrofa ENSSSCG00000003588 I 0.736
SRSF4 Spermophilus tridecemlineatus ENSSTOG00000015908 N 0.000
SRSF6 Tupaia belangeri ENSTBEG00000013448 N 0.000
SFRS4 Taeniopygia guttata ENSTGUG00000000765 N 0.000
SFRS6 Taeniopygia guttata ENSTGUG00000003455 I 0.705
SRSF4 Tetraodon nigroviridis ENSTNIG00000000115 I 0.729
SRSF4 Tetraodon nigroviridis ENSTNIG00000005573 I 0.729
SRSF4 Takifugu rubripes ENSTRUG00000011891 I 0.729
SRSF4 Tarsius syrichta ENSTSYG00000007903 I 0.729
SRSF4 Tursiops truncatus ENSTTRG00000002572 I 0.736
srsf6 Xenopus tropicalis ENSXETG00000025503 I 0.713
WUBG_08240 Wuchereria bancrofti WUBG_08240 N 0.000