nasonia_NCBI_hmm496514 (Nasonia vitripennis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 nasonia_NCBI_hmm496514 T32258_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.893
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm496514 RRM 56 124
nasonia_NCBI_hmm496514 RRM 324 394

Links

Other RRM family RBPs
Other Nasonia vitripennis RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
62054 Helobdella robusta 62054 I 0.757
90208 Helobdella robusta 90208 I 0.794
AAEL014033 Aedes aegypti AAEL014033 I 0.886
AGAP004950 Anopheles gambiae AGAP004950 I 0.893
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.914
CJA07020 Caenorhabditis japonica CJA07020 I 0.736
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.807
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.721
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.807
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.771
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.721
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.807
BRUNOL6 Homo sapiens ENSG00000140488 D 0.771
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.836
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.857
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.850
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.871
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.809
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.721
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.786
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.864
HEXA Macaca mulatta ENSMMUG00000010687 I 0.771
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.829
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.814
Celf6 Mus musculus ENSMUSG00000032297 I 0.779
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.857
CELF2 Ornithorhynchus anatinus ENSOANG00000015432 I 0.721
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.771
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.771
CELF6 Oryzias latipes ENSORLG00000013392 I 0.857
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.771
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.857
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.700
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.871
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.843
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.764
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.857
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.843
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.743
estExt_fgenesh2_pm.C_730008 Branchiostoma floridae estExt_fgenesh2_pm.C_730008 I 0.721
GF10965 Drosophila ananassae FBgn0088005 I 0.893
GG13757 Drosophila erecta FBgn0106020 I 0.893
GH14684 Drosophila grimshawi FBgn0122160 I 0.893
GI13095 Drosophila mojavensis FBgn0135852 I 0.893
GL21647 Drosophila persimilis FBgn0159240 I 0.879
GM24582 Drosophila sechellia FBgn0179445 I 0.893
GD12651 Drosophila simulans FBgn0184378 I 0.893
GJ13842 Drosophila virilis FBgn0201061 I 0.893
GK17101 Drosophila willistoni FBgn0219100 I 0.893
GE20053 Drosophila yakuba FBgn0237378 I 0.893
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.900
bru-3 Drosophila melanogaster FBgn0262350 D 0.893
LOAG_05508 Loa loa LOAG_05508 I 0.800
PHUM315130 Pediculus humanus PHUM315130 I 0.886
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.729
Smp_041280 Schistosoma mansoni Smp_041280 I 0.814
Smp_131780 Schistosoma mansoni Smp_131780 I 0.736